Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04939 ATGGTTTGTTGGAAAATTGCTACACAGAGAAGTTCAACAATGAGCAGGAATTTGAGTCCTGTGCTGCGAAAACAGCTTGAAAATCTCGACAAAGATGCTGACAATCGTAAATCTGCATTGATAGCAGAAGAGACAGAAGCAGATAATGAGAGGTTGGAGAAGGATTTGGAGGAAATAAAGCTACAAATTGAAGAACTGAAGAAGATTTTGGTTATACTCATAAAGACATATGGAAATGGGAAGACTACTATTTCAATATATGAAAGGAAAGCAAGCATAAGACAATTTTATTCGGTTATATTTCCTGCTCTATTGCAACTTCAAATGGGCATCACAGATTTGGATGAAAGGGGACTGCATCAGAATCTTTCTGGTGTTTGGAAGAAGCAGAGGATAAAAGTACTCAAGAGGGTTTTTCGTTTGAAACGGGGAATGATCCACATACAATTAATTTTTTATCTTAAACAAAAGGGAATCAAGTTAAGTGATGAAACAAGCTCACAAGATTTTGAAGATAACTATCAGTCCAAGACTGATTTGCTCAAAGCCGTTGCGATATTTGTCGCGGCTGCAACTGGGACAGTTGCAATTAACCATTCTTGGGTTGCTGCAAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATCATATTTGAAGAATCTTTAGCATTCAACAAAAGTGGGGTAGGACTATTGATGGCTGTAAGCTTATGGGTGATAAGGAGTATTGGGGTAAATATCTATCTTTTATATGTTTTGGCTTTTGAGAATGTCAGATAA 795 0.3711 MVCWKIATQRSSTMSRNLSPVLRKQLENLDKDADNRKSALIAEETEADNERLEKDLEEIKLQIEELKKILVILIKTYGNGKTTISIYERKASIRQFYSVIFPALLQLQMGITDLDERGLHQNLSGVWKKQRIKVLKRVFRLKRGMIHIQLIFYLKQKGIKLSDETSSQDFEDNYQSKTDLLKAVAIFVAAATGTVAINHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGVNIYLLYVLAFENVR 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04939 264 Coils Coil 42 76 - -
Trre15g04939 264 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 162 250 IPR045016 GO:0006814|GO:0015297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04939 Trre-Chr15 59419879 59424333 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04939 163 249 Antiporters AT3G19490 81.609 3.28e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04939 - - cpap:110810493 156.762