Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04918 ATGGAGAGCAAGGTTGTTATAAGAGAGTTTGATGAAGATAGAGATGTTAAAGTGGTAGGGAAGCTTGAAAGGAACTGTGAGATTGGGACTACTAAAAAGGGTTTATCCATTATCATGAGTGACCCTTTATCTAGGATTAGGTTCTACCCTCTTCGTATTATGTTGGTAGCTGAGCTGGTTGAAAGCAATGAGCTTGTTGGAGTTGTTAGAGGATGCATTAAAAGTGTGCAAACTTCTTATGGATCACTCTTCAAGATGGGATGCATACTAGGTCTTAGAGTCTCTCCTATTCATAGGAGAAAGGGGGTTGGACTAAAACTTATAACCTCAATTGAAGAATGGATGCTAAGAAATGGTGCTGACTATGCATTCCTAGCCACAGAAAAGAACAACAATGCCTCTAAAAACCTATTCACAAATAAATGCAACTATGTCAATCTCACCTCACTTACCATATTTCTCCATCCAACAACATTCCCTACAAACCACATTTCCAACAAGGACATAAAAATTGACAAATTAAACATAGATCAAGCAATATCCTTGTACACAAGAATCTTTAAGACCAAAGATTTGTATCCATTAGACATGGATGTTATTCTCAAAGAAAAACTAAGCCTAGGTACTTGGGTTAGTTATTACAAAAATGAAGGCTTCAAACTCAATAATAATGAAGACATTATTACAAATAAAAGTACATCAAACTCATCATGGATTATTTTTAGTTTATGGAATACTTGTGAAGCTAATGATCATAAGGTTCATGTTAAGACAAAATTATTTCAACCACTTAGGTTTCTTCATGCGACATTAAATCATGCAAAAGACAAAATATGTCCATGTTTGAGAATGTTGGGAAATGATGAGTCATTGATGTGTGAAAGTTTAGGGTTTCTTTTTCTTTATGGACTTCATGGAGAAGGAGAGAACCTTGGAGAATTAATGGAATCAATATGGAGTTTTACAACAAAATTAGGAGAGAAATTAAAGGATTGTAGAGTGGTTATTACCGAATTAGGGTTTGGTGATCCACTTGCAAACCATGTTCCTCAAATGGAATCTATGTCATGTATTGATGATATGTGGTACACAAAAAGACTTGCAGCAAGGGACAGTGATGATGATGATGATGATGAATTGGTGCAGCAGGTTATGAAGAGACAACTCGGGAATGTGTTTGTGGATCCTAGAGATTTTTAG 1200 0.3558 MESKVVIREFDEDRDVKVVGKLERNCEIGTTKKGLSIIMSDPLSRIRFYPLRIMLVAELVESNELVGVVRGCIKSVQTSYGSLFKMGCILGLRVSPIHRRKGVGLKLITSIEEWMLRNGADYAFLATEKNNNASKNLFTNKCNYVNLTSLTIFLHPTTFPTNHISNKDIKIDKLNIDQAISLYTRIFKTKDLYPLDMDVILKEKLSLGTWVSYYKNEGFKLNNNEDIITNKSTSNSSWIIFSLWNTCEANDHKVHVKTKLFQPLRFLHATLNHAKDKICPCLRMLGNDESLMCESLGFLFLYGLHGEGENLGELMESIWSFTTKLGEKLKDCRVVITELGFGDPLANHVPQMESMSCIDDMWYTKRLAARDSDDDDDDELVQQVMKRQLGNVFVDPRDF 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04918 399 CDD NAT_SF 54 125 - -
Trre15g04918 399 Gene3D - 12 154 - -
Trre15g04918 399 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 2 399 - -
Trre15g04918 399 Pfam Acetyltransferase (GNAT) family 59 144 IPR000182 GO:0016747
Trre15g04918 399 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 5 206 IPR000182 GO:0016747
Trre15g04918 399 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 4 139 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04918 Trre-Chr15 59258982 59260719 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre15g04918 Acetyltransf_1 2e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04918 - - psat:127073193 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04918 15 59258982 59260719 Trre15g04918 15 59258982 59260719 ECH