Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04845 ATGGGCGGCCAGATGCATCAGAGCAATGCTGCCGCGGCTGCTCTGTATGACAATGCCGGCGCCGCTGTACACAGTGCAGCGCCAGGGACTGCTACCGATGCCGGCGATGCTGTTATGGCTCGTTGGTTGCAATCCGCCGGCTTACAGCATCTGGCCTCTCCATTGGCTTCCACTGCAATTGATCAACGGCTTCTCCCCAACCTTCTCATGCAGGGTTATGGAGCACAGTCTGCGGAAGAAAAACAGAGGCTTTTTAAGTTAATGAGAAGTCTCAATTTTAATGGGGAGTCTGGTTCAGAACCATATACGCCCACTTCCCAAACTTTAGGCGGAGCGGCTGTAATAGATGGGTTTTATTCTCCAGACTTTAGGGGGGATTTCGGAGCTGGTCTCTTGGATCTTCATGCTATGGATGATACGGAGCTTTTGTCTGAGCAAGTTATCTCAGAACCCTTTGAGCCATCACCCTTTATTCCTGGAGGTACCAGAGAATTTGAAGACAATTTCAACTCAGTCAGCTTCAAGCAGGGAGGAGAAGAAACAATTGTTGATGCATCAAATTCTTTACCTGTGAATGAAAAAGAGAATAATACAAGAGAAAATAATGTTGCTAAGATAAAAGTTGTGGTACGCAAAAGACCTTTAAATAAAAAGGAGCTTGCTAAGAAGGAGGATGATATTGTAACTGTATGTGACAATGCATATTTGACCGTTCATGAACCTAAAGTGAAGGTTGATTTGACAGCTTATGTGGAGAAGCATGAGTTTTGTTTTGATGCTGTTATTGATGAGAATGTTACCAATGATGAAGTATATCGAGTTACGGTAGAACCTATTATTCCTACAATTTTTGAGAGGACCAAAGCTACCTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATTCACAATGCAACCATTACCACTCAGAGCTGCAAATGACCTTGTTAGACAGTTGCACCGGCCTGTTTACCGAAATCAGAAATTTAAATTGTGGCTTAGCTACTTTGAGATATACGGTGGAAAACTGTTTGATCTTCTTGGCGACAGGAAGAAACTCTTAATGAGAGAAGATGGACGACAGCAAGTTTGTATTGTAGGACTGCAAGAATTTGAAGTTTCTGATGTACAGATTGTCAAAGAATTCATTGAAAAGGGGAATGCAGCAAGAAGTACAGGATCCACTGGTGCGAATGAGGAGTCCTCCAGGTCACATGCTATCTTACAATTGGTTGTAAAGAGGCACAACGATGTAATAAAAGAGAGCAGGCGAAATAATGATGGAAATGAGACAAAAAGTGGGAAGGTTGTGGGGAAGATTTCTTTCATTGATCTTGCTGGAAGTGAAAGAGGTGCTGACACTACTGACAATGACCGTCAGACAAGGATTGAAGGAGCTGAAATCAACAAGAGTCTTTTGGCTTTGAAGGAGTGCATTCGAGCTTTGGACAACGACCAGATCCATATTCCTTTTCGCGGAAGTAAACTTACAGAAGTGCTCCGTGACTCTTTTGTTGGCAATTCAAAGACAGTCATGATCTCTTGTATATCTCCAAATGCGGGATCCTGTGAACACACACTTAATACCTTGAGATATGCTGATCGAGTTAAGAGTCTGTCCAAAAGTGGCAATCCTAGAAAGGATCAGGCCCCAAATCCAGTACCACAGTCAGATAAAGAGGCTTTATCCACATCATCCCTTCCAGATAGTACTAGTGCCGAGGATTTTTATGATCAACGTCAAGATGTGAAAACAGTGGATATGGGCAGGAAAGTTATTGAGAAGGAAAAATTGTTGTACAGCTCTGGTGCTGATGCTGACAAGCAACCATCGAGTTTTTCTTCTTCCAGTTTTTTATTCAGCGGACGAGAGGAGAAAGGTTTGCCTTCTGTCTCAATGGACAGGAACAGGTTTGAAGTGAAGAATTCGACTAATCAAAAGATTAACCCTTATTCCCAAAATGATGCGGACGATAAAGTGCAAAAGGTGTCTCCTCCACGCAGAAAAGGGGCCAAGGAGGAGAGATCTGAAAGGTCTTCGAATTGGCCAAAAAGGGATCCCAATGGTTATGATCATTTCACCACTAGCTCCAAGCAAAGCACGGGGAATTATAACACAGTTGCCACTGGATCCAGGCAGCTGGAAACAGAATCCTCCTCACCTGATGTGAATATCAGCGCCGTTCTTGAGGAGGAAGAAGCATTAATTGCTGCTCATAGGAAAGAAATTGAGGATACAATGGAGATTGTCCGTGAAGAAATGAAACTATTAGCAGAAGTGGACCAGCCAGGAAGTCTTATTGACAACTATGTAACCCAGTTGAGTCTTGTGCTTTCTCGCAAAGCAGCTAGTCTTGCAAGTCTTCAAGCTCGCCTTACAAGATTCCAACATCGACTAAAAGAACAAGAGATACTAAGCAGAAAAAGAGTACCCCGTTAA 2442 0.4316 MGGQMHQSNAAAAALYDNAGAAVHSAAPGTATDAGDAVMARWLQSAGLQHLASPLASTAIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRSLNFNGESGSEPYTPTSQTLGGAAVIDGFYSPDFRGDFGAGLLDLHAMDDTELLSEQVISEPFEPSPFIPGGTREFEDNFNSVSFKQGGEETIVDASNSLPVNEKENNTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTVCDNAYLTVHEPKVKVDLTAYVEKHEFCFDAVIDENVTNDEVYRVTVEPIIPTIFERTKATCFAYGQTGSGKTFTMQPLPLRAANDLVRQLHRPVYRNQKFKLWLSYFEIYGGKLFDLLGDRKKLLMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNDVIKESRRNNDGNETKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDQAPNPVPQSDKEALSTSSLPDSTSAEDFYDQRQDVKTVDMGRKVIEKEKLLYSSGADADKQPSSFSSSSFLFSGREEKGLPSVSMDRNRFEVKNSTNQKINPYSQNDADDKVQKVSPPRRKGAKEERSERSSNWPKRDPNGYDHFTTSSKQSTGNYNTVATGSRQLETESSSPDVNISAVLEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSLVLSRKAASLASLQARLTRFQHRLKEQEILSRKRVPR 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04845 813 MobiDBLite consensus disorder prediction 540 581 - -
Trre15g04845 813 PANTHER KINESIN-RELATED PROTEIN 6 32 811 IPR027640 GO:0003777|GO:0007018
Trre15g04845 813 MobiDBLite consensus disorder prediction 691 706 - -
Trre15g04845 813 MobiDBLite consensus disorder prediction 544 575 - -
Trre15g04845 813 CDD KISc_KIF2_like 205 538 - -
Trre15g04845 813 FunFam Kinesin-like protein 184 543 - -
Trre15g04845 813 ProSiteProfiles Kinesin motor domain profile. 205 540 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g04845 813 Pfam Kinesin motor domain 211 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g04845 813 Coils Coil 730 761 - -
Trre15g04845 813 MobiDBLite consensus disorder prediction 661 686 - -
Trre15g04845 813 SMART kinesin_4 203 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g04845 813 MobiDBLite consensus disorder prediction 629 706 - -
Trre15g04845 813 MobiDBLite consensus disorder prediction 637 660 - -
Trre15g04845 813 PRINTS Kinesin heavy chain signature 440 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g04845 813 PRINTS Kinesin heavy chain signature 396 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g04845 813 PRINTS Kinesin heavy chain signature 286 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g04845 813 PRINTS Kinesin heavy chain signature 490 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre15g04845 813 Gene3D Kinesin motor domain 180 543 IPR036961 -
Trre15g04845 813 ProSitePatterns Kinesin motor domain signature. 439 450 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trre15g04845 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 540 IPR027417 -
Trre15g04845 813 Coils Coil 786 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04845 Trre-Chr15 58666790 58672999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04845 197 540 Calmodulin-binding Proteins AT5G65930 34.463 4.10e-43 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04845 K10393 - gmx:100778915 1318.14