Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04837 ATGGCGGATTCATTATGGCAAAATTGGAAGAATCGAGACTTTACTCTTGCTTCGGTTTCCGACCTCTCTGACTCTTCCGATGCTTCATCGCCGGGAATTGCTCGCTTCACCTCCGATGCTCTTCAAATTCATCCTGAATCTCCACAGATTCCTCTCAATTTCGATCTCCGAACTGCTCAGATATTGAAACTAGGTCCTGTTCAATCGCTTTGCGTTACGGAAGGTTCTGATGACGGTAAATCGGGATCTTATTCTACGGGAGTCAGTATCCAGTTTAAAAACGAGGAGGATTGTGCGGCCTTTCATTCTGCAGTCCAACAATGGATAAAGGAAAACAATGTTCAAGCAGGAAACTTGCCAAATGGAACTTTAACAACATCTAAAAGCAAATTTGATGAAAAGATAGAGCCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTTCATCAGCAAAACATGTTGCAGGACTATGTGCGGACAGGAACTTATTATGCTGCGGTTATTGAGAACCGTGCGGATTTTACTGGTCGTGTAGTAGTTGATGTGGGTGCTGGTAGCGGTATTTTGTCATTGTTTGCTGCTCAGGCCGGTGCCAAACATGTTTATGCTGTGGAAGCCTCTGAAATGGCAGAATATGCACGTAAACTCATAGCTGGGAACCCAAAATTGGCTCAACGAATTACAGTGATTAAAGGTAGAGTTGAGGATGTTGAGTTGCCCGAGAAAGCAGACATTCTGATCTCGGAGCCCATGGGCACTTTGTTAGTTAATGAGAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACTCCTACTGGGAAAATGTTTCCTGGGGTGGGAAGGATTCACATGGCACCTTTCACAGATGAATATTTGTTTATTGAAATTGCTAATAAGGCCCTATTCTGGCAGCAGCAAAATTATTATGGTGTGGATTTGACACCCTTACACGGGACTGCATTTCAAGGATATTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAATAGCTCCCCCAATGTTCCATGTATTAGACTTCGGCAAAATGAAGGAAGAAGAATTGTATGAAATTGACATCCCTCTGAAATTCACTGCCTCTGTGGGCACCAGAGTACATGGGTTGGCATGTTGGTTTGATGTACTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCACCCACAACCCATTGGTACCAGCTACGATGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGGCAAGAAATTACCGGCAGGCTTCATTTGATTGCACACAATGCACAGAGTTATACAATATATTTAACATTGTCTGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGGATTCTTCAAACATCATCTTGTAAGCTTGATCTCAAAGAACCCTACTATAGAATGTCCCAACCACAAGCTTATCCGTTAGCCCAAGATCAGCAACCTCAACCACTTGTACAAACACAGGATATACATATCCAATCTCAGGAATTGGAAGAACCAGAAATAATGCAACAGCTTTCGCCTAATTCTTGTGCTCAGATTGATTCGCTGATGCAGAAGATTTAA 1608 0.4279 MADSLWQNWKNRDFTLASVSDLSDSSDASSPGIARFTSDALQIHPESPQIPLNFDLRTAQILKLGPVQSLCVTEGSDDGKSGSYSTGVSIQFKNEEDCAAFHSAVQQWIKENNVQAGNLPNGTLTTSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFTGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPKLAQRITVIKGRVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPTGKMFPGVGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPPMFHVLDFGKMKEEELYEIDIPLKFTASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPLAQDQQPQPLVQTQDIHIQSQELEEPEIMQQLSPNSCAQIDSLMQKI 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04837 535 FunFam Probable histone-arginine methyltransferase CARM1 285 493 - -
Trre15g04837 535 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 95 466 IPR025799 GO:0016274|GO:0018216
Trre15g04837 535 Gene3D Vaccinia Virus protein VP39 122 283 IPR029063 -
Trre15g04837 535 Coils Coil 528 535 - -
Trre15g04837 535 Gene3D - 285 493 - -
Trre15g04837 535 ProSiteProfiles Foamy virus protease (FV PR) domain profile. 1 11 IPR001641 GO:0004190|GO:0006508
Trre15g04837 535 CDD AdoMet_MTases 182 282 - -
Trre15g04837 535 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
Trre15g04837 535 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Trre15g04837 535 FunFam Probable histone-arginine methyltransferase CARM1 123 283 - -
Trre15g04837 535 Pfam Ribosomal protein L11 methyltransferase (PrmA) 178 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04837 Trre-Chr15 58621775 58627745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04837 143 432 C2H2 Transcription Factor Family AT3G12270 34.416 2.86e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04837 K05931 - gmx:100780736 909.827