Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04831 ATGCTTAGTCCTGAAGGAGAAATTAAAATAAGTTTTGGCTACAAATGCAATAGTGGTAGAGATATCCCTAGCGAGATCGCCGACAGCTACAAAAATCTTCCCATAGTCCGTAGAGCAAGTAGTTTCTCTTGTTTGTCAGGTGCAGCTTTAAGTGCAAATGCTACACTAGCCAACACAAACATATGCAATGGTAAGATAGGTGTTGAAATCCTTCCAAGTTGGGATTCTCCTAATTCGTTTCGTAGAGTACCTTCTTCCCCAAGTCTTTCACGGTTCGATAGACTATCATCTTCGCTCCCAAATAGTCTCTCTTATTTAAGTTCCAGTCCTTCCACTACCAGTGATAGCCTTGAATACGACCCCTGCCAGTTGAAATGCGTGAGTGATCGTCCCAGTACCGACGGTTTTCTTATTGCGAAAGAAGTTCAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGTTGGCTCTTTTGTGCAATTTATGATGGATTTAATGGAAGAGATGCAGCTGATTTTCTGGCCGGTACCCTCTACGAAACCATCATATCTTACCTAGATAAGTTAATTTGGGAATTGGAGCCGGGTTCCATCACAACTTCCGACCATGCGGATTTGGGTGAATTCCTTCGATGTAAGTTGGATGATAGTCTTCATTGTTATGAGGATCATACTTTGTCAAAATCATCACGGGAGTCTTTTTCGCGCGGGGTACTTGATAGCCTCGACCGTGCTCTTAGTCAGGCTGAGAATGACTTCTTGTACATGGTTGAGCAGGAAATGGGAGAACGTCCGGATTTAGTATCTATTGGATCTTGTGTTTTGCTTTTGCTTCTTCACGGTAATGATTTGTATACACTGAATCTTGGCGACAGTAGAGCAGTACTAGCGACGTGCAGTAGCAGTGACAAAATGAATAAGAGTGAGAGACTCGAGGCTATACAGCTTACAGATAGTCACACTGTTGATAATGAAGATGAAAGGACTAGACTCGTGGCTGATCATCCCGATGATCCCAAGGTCGTCATAGCAGGAAAAGTGAAAGGTAAGTTGAAGGTTACTCGTGCATTTGGAGTTGGCTACTTGAAAAAGAAAAATCTGAATGATGCCTTGATGGGAATCCTTAGAGTTCGCGATCTTACGAGCCCGCCATATGTTTCCACTAAACCATCATTGAATGTGCATAAAATCTCAAATTCTGATCAATTTGTTATAGTAGGAAGTGATGGTTTATTTGACTTCTTCAGCAATGAAGAGGCAGTGAAGCTTGTCGAGTCTTTTATCTTAACCAATCCTTTTGGCGATCCGGCAAAGTTTCTCATAGAGCAGCTTGTAGCTAGAGCAGCTGATTCCGCAGGTTTCACATTGGAAGAGTTGATGAATGTTCCAGCCGGGAGGAGAAGAAAGTACCATGATGATGTTACTGTAATGGTGATCATGCTTGGAATGAATCAAAGAACTTCAAAAGCTTCAACTTGTATCTAA 1509 0.4221 MLSPEGEIKISFGYKCNSGRDIPSEIADSYKNLPIVRRASSFSCLSGAALSANATLANTNICNGKIGVEILPSWDSPNSFRRVPSSPSLSRFDRLSSSLPNSLSYLSSSPSTTSDSLEYDPCQLKCVSDRPSTDGFLIAKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYETIISYLDKLIWELEPGSITTSDHADLGEFLRCKLDDSLHCYEDHTLSKSSRESFSRGVLDSLDRALSQAENDFLYMVEQEMGERPDLVSIGSCVLLLLLHGNDLYTLNLGDSRAVLATCSSSDKMNKSERLEAIQLTDSHTVDNEDERTRLVADHPDDPKVVIAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLTSPPYVSTKPSLNVHKISNSDQFVIVGSDGLFDFFSNEEAVKLVESFILTNPFGDPAKFLIEQLVARAADSAGFTLEELMNVPAGRRRKYHDDVTVMVIMLGMNQRTSKASTCI 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04831 502 CDD PP2Cc 149 487 IPR001932 -
Trre15g04831 502 Gene3D - 107 498 IPR036457 -
Trre15g04831 502 ProSiteProfiles PPM-type phosphatase domain profile. 137 489 IPR001932 -
Trre15g04831 502 Pfam Protein phosphatase 2C 238 444 IPR001932 -
Trre15g04831 502 SUPERFAMILY PP2C-like 150 490 IPR036457 -
Trre15g04831 502 SMART PP2C_4 127 487 IPR001932 -
Trre15g04831 502 PANTHER PROTEIN PHOSPHATASE 2C 144 487 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04831 Trre-Chr15 58571344 58573144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04831 4 502 PP2C-type Phosphatase Gene Family AT3G16560 65.347 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04831 - - gmx:100808304 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04831 15 58571344 58573144 Trre3g01736 3 14103852 14106043 PCT