Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04818 ATGATTCATTATCACCGCCTCAGAGCTATTCTCAACCATCAAATCCCAAAATGTTACCTTCTTCACCCAACCCATTTTCTCAAACCATTCACCACTTCAGATTCAGATCAACAATCTTTCACTGTTTCATACCTCACCAACACTTGCGGTTTATCTCCTAACAAAGCTCTTAAAGCATCAAAACTAATTCGTTTCAACACCCCTAATAAACCAGATTCCGTTATCGCCTTTTTCAAAACCCACGGTTTCTCCAATGACAAGATACAATCCATCATTCACAAAGCACCATCACTCTTAACATTCGATCCCATCAAAACCATTTTGCCAAAGTTTCAATTTTTATCCTCCAAAGGTGCTTCTCCATCTGACATTGTTGACACAGTCACCAGAGCCCCCAATTTCCTCCGTGCAAGCCTTGACAAACAATTAATCCCTGCTTTTCAATTGGTTTTGGAGGAGATTAAGGAATTAGGGTTTGATCCTTCATCATACAAGTTTTGTATGGCATTATTAGCCAAAAGGGCTATCACCAAATCTCAATGGGATGCTAAAATTGGTGCCTTGAAGAGTTGGGGTTGTTCTGAAGATGAAATTTTTAATGCTTTTAAAAAACAGCCTAACATTATGCTACGGTCTCCGGACAAATTGAACGCGGTGATGCGTTTTTGGATGGAGCAGTTTGGTTGGGATCCTTTAGTACTCCTGGCAGCACCCGATATTTTCGGATTTAGTATAGAGAAAAGGCTTATTCCGAGGGCTTCTGTTGTCCAGTATCTTCTGTCCAAAGTTAAGCGTGGGATTGGAGAGCAAGAAGGTTTGAGTAGAAGTGTTATGCAACTGTCCTACGTCAAAGTAACTCTTGCACCAGGGACACTGATCATGTGTGCATGGGGAATACTGCCATAA 906 0.4106 MIHYHRLRAILNHQIPKCYLLHPTHFLKPFTTSDSDQQSFTVSYLTNTCGLSPNKALKASKLIRFNTPNKPDSVIAFFKTHGFSNDKIQSIIHKAPSLLTFDPIKTILPKFQFLSSKGASPSDIVDTVTRAPNFLRASLDKQLIPAFQLVLEEIKELGFDPSSYKFCMALLAKRAITKSQWDAKIGALKSWGCSEDEIFNAFKKQPNIMLRSPDKLNAVMRFWMEQFGWDPLVLLAAPDIFGFSIEKRLIPRASVVQYLLSKVKRGIGEQEGLSRSVMQLSYVKVTLAPGTLIMCAWGILP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04818 301 PANTHER CGI-12 PROTEIN-RELATED 151 267 IPR003690 GO:0003690|GO:0006355
Trre15g04818 301 Gene3D Transcription termination factor 3, mitochondrial 37 281 IPR038538 -
Trre15g04818 301 SMART mt_12 199 230 IPR003690 GO:0003690|GO:0006355
Trre15g04818 301 SMART mt_12 125 160 IPR003690 GO:0003690|GO:0006355
Trre15g04818 301 SMART mt_12 231 266 IPR003690 GO:0003690|GO:0006355
Trre15g04818 301 SMART mt_12 89 120 IPR003690 GO:0003690|GO:0006355
Trre15g04818 301 FunFam Mitochondrial transcription termination factor-like 69 267 - -
Trre15g04818 301 Pfam mTERF 76 155 IPR003690 GO:0003690|GO:0006355
Trre15g04818 301 Pfam mTERF 181 258 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04818 Trre-Chr15 58475276 58477830 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre15g04818 mTERF 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04818 K15032 - gmx:100792944 254.988