Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04753 ATGGTTGGAGGAGGAGCTTTATACGAGAAACTAACGACGATGATGACCTCAGATCACGCTTCCGTGGTGTCGCTAAACATATTTGTTGCTCTTCTTTGTACTTGCATCGTCATCGGTCATTTGTTAGAGGAAAACCGTTGGATTAATGAATCCATCACTGCTCTTCTCATTGGTTTGTGTACTGGTGTGTTAATATTGTTTACAACTGGAGGAAAAAGCTCTCATATAATGGTTTTCAGTGAAGATCTTTTCTTTATTTACCTTCTCCCACCTATCATTTTCAATGCCGGGTTTCAGGTCAAGAAGAAACAATTTTTCCGCAATTTTATGACTATAATGCTTTTTGGTGTGATTGGTACATTAATATCCTTCTGCATCATATCACTAGGTGCCATACACTTCTTCCAAAAATTAGATATTGGTTCCCTCAAGATTGGAGATTATCTAGCAATTGGAGCAATATTTTCAGCAACAGATTCAGTTTGTACATTACAGGTTCTTAATCAAGATGAGACACCTTTACTATACAGTTTGGTGTTTGGAGAAGGGGTAGTAAATGATGCTACTTCTGTAGTACTCTTCAAAGCAATTCAGAATTTTGACCTCTCCCACATTGACTTAACCACTGCTTTACATTTACTAGGAAATTTTTTATATTTATTCATAGCAAGCACTGTGTTGGGAATCTTTGTTGGATTGCTTAGTGCATTCATTATTAAAAAGCTCTATTTTGGCAAGTTGATAAGACACTCTACAGACCGCGAGGTTGCTCTCATGATACTAATGGCTTACCTTTCATATATGCTAGCAGAACTATTTTCTTTAAGTGCAATTCTGACTGTTTTCTTCTGCGGCATTCTTATGTCGCATTATACGTGGCATAATGTAACAGAAAGTTCAAGAGTGACAACAAAGCATACTTTTGCTACAATGTCATTCATTGCTGAGTTATTTATCTTCCTTTATGTTGGGATGGATGCATTAGATATAGAGAAGTGGCGATTCGTAAGTCAAAGCCCAAAAAAATCAATTGGGGTCAGTTCATTGCTGTTGGCTCTTATCCTAGTGGGAAGAGCTGCATTTGTTTTTCCTCTTTCCTTCATATCCAACTTGTCTAAGAAGTCTCAATCTGAGAAAATTGAGTTTAAGCAACAAGTGACAATTTGGTGGGCAGGTCTCATGCGTGGAGCTGTTTCTATTGCACTTGCTTACAATCAGTTTACCAGGCTAGGACATACTATATTGGGTGAGAATGCCATCATGATCACTAGTACTATTACGGTTGTACTCTTCAGCACAGTGGTGTTTGGCTTGATGATGAAGCCGCTTGTGAGGTTATTGCTTCCTTTGTCTAAACACATAATAATCAGCATACCATCCCCACCATCGAGTCCAAAATCGCTCCGTGTGCCACTTCTTGGCAATGGAGAGGATGATGTAGGGGGCAATGGTGGGATTCAAAGACCGAGCAGATTGCGTATGCTTCTTAGGATCCCTAGTCATGGGGTACATCACCATTGGCGCAAATTTGATGATTCTTTCATGCGACCCGTCTTTGGTGGCCGGGGTTTTGTACCTTATGTTCCTGGATCACCCCTTTAA 1602 0.3964 MVGGGALYEKLTTMMTSDHASVVSLNIFVALLCTCIVIGHLLEENRWINESITALLIGLCTGVLILFTTGGKSSHIMVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGVIGTLISFCIISLGAIHFFQKLDIGSLKIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSHIDLTTALHLLGNFLYLFIASTVLGIFVGLLSAFIIKKLYFGKLIRHSTDREVALMILMAYLSYMLAELFSLSAILTVFFCGILMSHYTWHNVTESSRVTTKHTFATMSFIAELFIFLYVGMDALDIEKWRFVSQSPKKSIGVSSLLLALILVGRAAFVFPLSFISNLSKKSQSEKIEFKQQVTIWWAGLMRGAVSIALAYNQFTRLGHTILGENAIMITSTITVVLFSTVVFGLMMKPLVRLLLPLSKHIIISIPSPPSSPKSLRVPLLGNGEDDVGGNGGIQRPSRLRMLLRIPSHGVHHHWRKFDDSFMRPVFGGRGFVPYVPGSPL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04753 533 PANTHER SODIUM/HYDROGEN EXCHANGER 16 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Trre15g04753 533 Gene3D - 144 196 - -
Trre15g04753 533 PRINTS Na+/H+ exchanger signature 112 120 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre15g04753 533 PRINTS Na+/H+ exchanger signature 83 94 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre15g04753 533 PRINTS Na+/H+ exchanger signature 97 111 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre15g04753 533 PRINTS Na+/H+ exchanger signature 152 162 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre15g04753 533 Pfam Sodium/hydrogen exchanger family 27 445 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04753 Trre-Chr15 58055348 58058331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04753 5 532 Antiporters AT3G05030 72.659 0.0 790
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04753 - - ccaj:109808409 880.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04753 15 58055348 58058331 Trre15g04753 15 58055348 58058331 ECH