Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04745 ATGAATGTTTCAGCAATAAACTTGGTCTCTCCAAATTCTCTTCTCCGCCATTACCAGTTACTGCCAAGGACTGATGTAAATTTGAAGGCTGTATATCTTTTGGGAGACTGGTGGAGGTGGGTAATTGGAAGTTCACTTGGCTACATCCCTCAATCTACGGTTTTGAGATTTGGATCTTTGATGGACTGCAACAAAGAAGAGGCCTTAAGGGCCAAGGCCATTGCTGAGAAGAAGATGGAAAGTAGGGATTTCGTGGCGGCTCGAAAGTTTGCTCTTAAGGCTCAGAAGCTGTATCCTGTTTTGGAAAACATAGCTCAAATGCTTGTTGTTTGTGATGTGCACTGCTCTGCTGAGCAGAAAGTGGTTGATGATGAGGTTGATTGGTATGGAATTCTTCAGCTAGAACACACAGTTGGTGATACAATGATTAAGAAGCAGTACCGAAAGTTTGCTCTTCAACTTCATCCCGATAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGAGAAGCTCAAAGAGTGCTTTTAGACAGAGAAAAACGAACTAGATATGACATGAAGGTTAAGGCGAAAAAAACTGCTATGCCACATCATAATCCACAGAAGGTTCCTGCGAATTTCAATTCTGCAATGAAAAACAATGCCGGGCCCAATTTTACAAACTCGAAAACCCAGCAGCAGCCGCAGCAGCAGCAAAATAAGCAGCCCGCACAACAGCAAAATGGTGAGCGCCGTACTTTTTGGACTGCTTGTCCGTTTTGTTCTGTGAAGTATCAGTACTACAGAGAAGTTGTAAATAAACCTCTTCGCTGTCAACACTGCCATAAGCCATTCATTGCATATATTGTGGAAATACAAGGTACATCACAAACAACTAATTCAAGTCAGCAAGCTTCCAAGGAGAATGTTGGATTTCAAGGCAACTCGCATGCTGAGAAGTCCAATACAAACCCTTTCAAGAATAAAGTCCCGGTTGGTGTCTCTAGAAAGTCAAATGTAAAGAGAAACTGGAATCAAGTGGAAGAATGCAGTCAAAGCTCTGATTCTACAAGTGGCAGTGATTTTAGTGATTCTGAAATTGAAAGAGTGGGTGCTAAGTATGGTTTTCCAGGTGTAAGAAACCATTCAACTGAGCAGCAACGAAGATCTGTGCGACAGAAGCAAAAGGTTTCCTACAGTGATAATATGAGCAACAATGACAATGACTTATTAAGACCTTCCAAAAAGGGTCATGAGAATAGATCAACTTGTGGTGATGGTCAAAGTCATGGCGGGAAAACTAAAACTAATGATCAGAATGGTGTAACAGCTGATCCAAAAGATGAACATGAAAAGGTAAAACAGAAACAGGATTTTCATTCTAAAGAGAGCTCACTGGATAGAAATGAGGAAAAAAAGAGGGTGAGTGGAAAAGAAGCTGTGGGAGGGTCAAAGCATATGGATGAAACTTTAGAGAATTCTTCTCCAAATTCAATGTGCAAGACAACAACTCTTCCTAATGCTTATCCCTATTTCAATGCAGAGTTCAGTGATTTTGACAAGGACAAAAAAATAGAATGTTTTGCACCTGGGCAGATTTGGGCTATCTATGATGCAACAGATGGCATGCCTCGATTATACGCTTTGATTAGAAAAGTTTTCTCTCCTGGATTTAAGTTGCAGGCAACATGGCTTGAACCACATCCAGATGACAAAGATGAAATCAAGTGGGTAGATGAGGAATTGCCCGTTGCTTGTGGGAAATTTAAACTTGGTGCCACCGATATCTTTGAAGATCATCAGCTGTTTTCTCATCTGGTTCAATGCGAAAGGATTGGCCGCAATACTTTTCATGTGTATCCTAGAAAGGGAGAAACATGGGCTCTTCTTAAAAATTGGGATATCAAATGGTACATGGATGTGGAATCTCATAAGCAGTATGAATATGAGTTTGTTGAAATCCTGTCAGATTATGCCAATGGTGAGGGTGTATATGTTGGATACTTGGGTAAATTGAAAGGTTTTGTAAGCCTCTTCTTTCGAATTTTGAGAGAAGATAACAAGCCGTTTCAAATTCCATCCCTGGAGTTATTTAGATTCTCTCACATGGTTCCATCTTTCAAAATGACTGGTCAGGAAGGAGTTGGTGTTCATTTAGGATATTTAGAACTTGATCCTGCATCTTTACCAATGAATCTTGAAGAGATTGCTGTTCCTCAAAATTTGGATGCGAAGATTGGGCCTAGTTCATGTGGCAGTGAGAATGCAAGATCTTCAAAAATATCAAAACCCTTGATGACCCCTGACAAAGTTATATCCGCTCCCAAGTTTAATGTTGAAACAAGCAACATGACTGAGGTAAAGGATTCTTTTGATGATATCGATGACTGTCATGCTTGTCCAGATTCAACCCCTGAAGCTTTTGAAATTCCAGATGCTCAGTTCTTCAATTTTGAAACTGGGAGGTCCCTTGATAAGTTCCAGACTGGTCAAATATGGGCATTTTACAGTGATGAGGATGAAATGCCAAAATACTATGGTCAGATTAAAGAAATTGAGACTAGCCCTGATCTTAAATTGCATGTTTATTGGCTCGCTTGCTGTTGGCTACCACAGAATACTATTAAATGGGAAGATGAACATATGCTTACTTCATGTGGAAGATTTAAAGTCATTAAAACAAATGATTTTCTCTCGACTTACAGTAACCTGTCTTGTATTTCACATCAAGTTCAAGCTGATGCCATTGGTAAGAATTATGCCATCTATCCGAAAAAAGGCGAAGTATGGGCTCTTTACAGGAATTGGTCGAACAAAATCAAGTGTTCTGACCTGAAAAAATGGGAGTATGACATAGTGGAAGTTCTTGAAGAAGCTGATTTGTTTATAGAGACTTTAGTTTTAGAGCAGGTTAGTGGTTTTAGTTCTGTTTTCAGAGGCAAATCAAATGAAGGTTCTTCCGTCAGCCTGAGAATATCCAGAAAAGAATTGCTGAGGTTCTCTCACCAAATTCCAGCTTTCAAACTGACAGAACAGCATGGCGGCAATCTGAGAGGCTTCTGGGAGCTTGATCCAGGAGCGGTACCACCTTCATTCCTATTGCCTTAG 3096 0.4021 MNVSAINLVSPNSLLRHYQLLPRTDVNLKAVYLLGDWWRWVIGSSLGYIPQSTVLRFGSLMDCNKEEALRAKAIAEKKMESRDFVAARKFALKAQKLYPVLENIAQMLVVCDVHCSAEQKVVDDEVDWYGILQLEHTVGDTMIKKQYRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRTRYDMKVKAKKTAMPHHNPQKVPANFNSAMKNNAGPNFTNSKTQQQPQQQQNKQPAQQQNGERRTFWTACPFCSVKYQYYREVVNKPLRCQHCHKPFIAYIVEIQGTSQTTNSSQQASKENVGFQGNSHAEKSNTNPFKNKVPVGVSRKSNVKRNWNQVEECSQSSDSTSGSDFSDSEIERVGAKYGFPGVRNHSTEQQRRSVRQKQKVSYSDNMSNNDNDLLRPSKKGHENRSTCGDGQSHGGKTKTNDQNGVTADPKDEHEKVKQKQDFHSKESSLDRNEEKKRVSGKEAVGGSKHMDETLENSSPNSMCKTTTLPNAYPYFNAEFSDFDKDKKIECFAPGQIWAIYDATDGMPRLYALIRKVFSPGFKLQATWLEPHPDDKDEIKWVDEELPVACGKFKLGATDIFEDHQLFSHLVQCERIGRNTFHVYPRKGETWALLKNWDIKWYMDVESHKQYEYEFVEILSDYANGEGVYVGYLGKLKGFVSLFFRILREDNKPFQIPSLELFRFSHMVPSFKMTGQEGVGVHLGYLELDPASLPMNLEEIAVPQNLDAKIGPSSCGSENARSSKISKPLMTPDKVISAPKFNVETSNMTEVKDSFDDIDDCHACPDSTPEAFEIPDAQFFNFETGRSLDKFQTGQIWAFYSDEDEMPKYYGQIKEIETSPDLKLHVYWLACCWLPQNTIKWEDEHMLTSCGRFKVIKTNDFLSTYSNLSCISHQVQADAIGKNYAIYPKKGEVWALYRNWSNKIKCSDLKKWEYDIVEVLEEADLFIETLVLEQVSGFSSVFRGKSNEGSSVSLRISRKELLRFSHQIPAFKLTEQHGGNLRGFWELDPGAVPPSFLLP 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04745 1031 SMART dnaj_3 126 183 IPR001623 -
Trre15g04745 1031 Pfam DnaJ domain 127 188 IPR001623 -
Trre15g04745 1031 MobiDBLite consensus disorder prediction 205 245 - -
Trre15g04745 1031 MobiDBLite consensus disorder prediction 420 437 - -
Trre15g04745 1031 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 61 1025 - -
Trre15g04745 1031 MobiDBLite consensus disorder prediction 392 406 - -
Trre15g04745 1031 CDD DnaJ 127 180 IPR001623 -
Trre15g04745 1031 MobiDBLite consensus disorder prediction 295 325 - -
Trre15g04745 1031 PRINTS DnaJ domain signature 147 162 IPR001623 -
Trre15g04745 1031 PRINTS DnaJ domain signature 163 183 IPR001623 -
Trre15g04745 1031 PRINTS DnaJ domain signature 129 147 IPR001623 -
Trre15g04745 1031 MobiDBLite consensus disorder prediction 295 495 - -
Trre15g04745 1031 Gene3D DnaJ domain 124 250 IPR036869 -
Trre15g04745 1031 MobiDBLite consensus disorder prediction 438 482 - -
Trre15g04745 1031 SUPERFAMILY Chaperone J-domain 123 190 IPR036869 -
Trre15g04745 1031 ProSiteProfiles dnaJ domain profile. 127 191 IPR001623 -
Trre15g04745 1031 MobiDBLite consensus disorder prediction 193 245 - -
Trre15g04745 1031 Pfam Domain of unknown function (DUF3444) 507 709 IPR024593 -
Trre15g04745 1031 Pfam Domain of unknown function (DUF3444) 802 1008 IPR024593 -
Trre15g04745 1031 MobiDBLite consensus disorder prediction 334 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04745 Trre-Chr15 57996126 58000548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04745 64 283 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 9.14e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04745 - - psat:127073362 1486.09