Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04721 ATGGGTTGTGTTCATGGAAAGTGTTGCTGTATTGAAAATTCTTCATTGAATGGAGACTCTAGAAAACATGGCTTCCATCATAGCCATAGGAAGAATATACTTGCTCAGAGAGTATTGAAAAATGTTTCTGTTCCTTCCCATAACTTTGTTTTGGAATATACCTTTCTCACACTGCGAGGATACTACCCGGATTCGCTGGATAAACAGAACCAAGATAGTTTTTGCATTAGGACACAAATCCAAGGTAATCCTGATATCCATTTCTTTGGTGTTTTTGATGGGCATGGTCAGTTTGGTAGTCAGTGTTCAAACTTTGTTAGGGATAGGTTGGTTGAAAAATTATCGAATGATCCTGCATTGGTGGAGGATCCTGTTCAAGCTTACAATTCTGCGTTCGCGGCAACAAATCATGAGTTGCATACTAGTGACATTGATGATGCTATGAGTGGTACAACAGCAATTACAGTGCTTGTTGTTGGAGACACCCTTTATGTTGCTAATGTTGGTGATTCGAGAGCTGTGATAGCTGTTAAAGATGGTGATCGGATTACCGCAGAGGACTTGTCGTCTGATCAGACACCATTTCGGAGAGATGAATATGAGAGAGTGAAACTTTGTGGAGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGATCAAGGATCCAAATATCCAGCATTGGGGTAACGAAGAGAGTTGGGATGGCGATCCTCCAAGATTGTGGCTTCCACATGGGATGTATCCTGGAACTGCATTTACAAGGAGTTTAGGGGATAGGTTGGCGGAGACAATTGGTGTGGTTGCTACTCCAGAGGTGTCAATAGTTCGGCTTACACCTAATCATCTCTTCTTTGTTGTTGCTAGTGATGGCATATTTGAATTCTTGTCAAGCCAAACTGTTGTTGATATGACAGCGAGATATACAGATCCCCGCGATGCATGTGCCGCTATTACTGAAGAGTCGTATAAACTATGGTTGGAACTTGTGAATCGAACAGATGATATAACAATTATCATTGTCCAGATTAAAGGACTTTCTAATTCAAGTACATCTGGAGTTGAATTAAGTGAGGTCAATGCTGAGACTGCAACGAGAACCAAGACAGGAACTTCGGATACATCTGCTACCACTGAGTTTGATGTTTATCATTCTATGACAAACAGTTTCTCTGATTCACAATCCTGCCAGCATGTGGCTTCACTGAGTAGCCCGGGCACAGTTGTTTACTCTCAGTCATCTCAAAGATCAATTGAATCGTGA 1260 0.4175 MGCVHGKCCCIENSSLNGDSRKHGFHHSHRKNILAQRVLKNVSVPSHNFVLEYTFLTLRGYYPDSLDKQNQDSFCIRTQIQGNPDIHFFGVFDGHGQFGSQCSNFVRDRLVEKLSNDPALVEDPVQAYNSAFAATNHELHTSDIDDAMSGTTAITVLVVGDTLYVANVGDSRAVIAVKDGDRITAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGIKDPNIQHWGNEESWDGDPPRLWLPHGMYPGTAFTRSLGDRLAETIGVVATPEVSIVRLTPNHLFFVVASDGIFEFLSSQTVVDMTARYTDPRDACAAITEESYKLWLELVNRTDDITIIIVQIKGLSNSSTSGVELSEVNAETATRTKTGTSDTSATTEFDVYHSMTNSFSDSQSCQHVASLSSPGTVVYSQSSQRSIES 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04721 419 ProSitePatterns PPM-type phosphatase domain signature. 88 96 IPR000222 GO:0043169
Trre15g04721 419 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 47 344 - -
Trre15g04721 419 SMART PP2C_4 48 340 IPR001932 -
Trre15g04721 419 PANTHER PROTEIN PHOSPHATASE 70 341 IPR015655 GO:0004722|GO:0006470
Trre15g04721 419 Pfam Protein phosphatase 2C 71 320 IPR001932 -
Trre15g04721 419 ProSiteProfiles PPM-type phosphatase domain profile. 52 342 IPR001932 -
Trre15g04721 419 CDD PP2Cc 68 342 IPR001932 -
Trre15g04721 419 Gene3D - 51 344 IPR036457 -
Trre15g04721 419 SUPERFAMILY PP2C-like 40 344 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04721 Trre-Chr15 57841229 57843861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04721 1 347 PP2C-type Phosphatase Gene Family AT3G06270 68.876 1.32e-176 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04721 - - gmx:100797866 635.18