Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04694 ATGGTTTATGAAAACATTATCGACGCCACGGAACAATTTGACAACAAACATCTCATTGGGGTAGGAGGGCATGGAAGTGTTTACAAAGCAGAGTTGGCTACAGGTCAAGTGGTAGCTGTGAAGAAACTCCATTCATTAGAAAATGGAGAAGTGTCTAATCTAAAAGCTTTTGCTAGTGAGATAAGTGCTTTGACAGAAATCCGACATCTGAACATTGTAAAGTTATATGGATTTTGTTCACATTCACTACACTCATTTTTGGTTTATGAGTTCTTAGAGAAGGGTAGTGTGGACAAAATTTTGAAAGATGATGAACTAGCATCTGTATTTGATTGA 336 0.369 MVYENIIDATEQFDNKHLIGVGGHGSVYKAELATGQVVAVKKLHSLENGEVSNLKAFASEISALTEIRHLNIVKLYGFCSHSLHSFLVYEFLEKGSVDKILKDDELASVFD 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04694 111 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Trre15g04694 111 PANTHER LEUCINE RICH REPEAT KINASE 2 1 108 - -
Trre15g04694 111 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Trre15g04694 111 Pfam Protein kinase domain 14 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g04694 111 FunFam Leucine-rich repeat receptor protein kinase MSP1 1 91 - -
Trre15g04694 111 SUPERFAMILY Protein kinase-like (PK-like) 3 104 IPR011009 -
Trre15g04694 111 ProSiteProfiles Protein kinase domain profile. 13 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04694 Trre-Chr15 57602068 57602403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04694 3 111 Receptor kinase-like Gene Family AT4G08850 52.679 5.31e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre15g04694 Pkinase 5.3e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04694 - - tpra:123910542 205.682