Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04664 ATGGACGCAACATCAGAAGTTATGAATCAATTCGATGAATCGATGAAGAAACAAATAGCATTACTTTTGAAGGTTGTGCTTTTAAATAAATCATTGAAAGAGGATAATGTTCCTTGCGAAATTGATCAGGGTCTCTTTTTGGGTTCGGTTGGTTCTGCGGCAAACAAGGTTGCTTTGAAAAATGTTAATGTTACTCATATTTTAACTGTGGCTGGGAAGATTGCACCTGCATATCCTGCGGATTTCGTCTATAAAGTTATAGATGTTGCTGATAAAGAGGATACAAACTTAAAACAATACTTCAACGAGTGTTTTGATTTTATTGACGAAGCCAAAAGAAATGGTGGATATGTTTTGGTTCACTGTTATGCTGGAAGATCAAGGAGTGTGACTATCATTGTGGCATATTTGATGAAGTCTCGTGGAATGAGCTTATCTGAAGCTCTGCAACATGTAAAGAATAAAAGACCACAAGCAGCTCCAAATCGCGGTTTCATTCGTCAGCTGGAGGACTTTGAGAAATCTCTTCAAGGTGAAAACTGCATTAGTCTTAAATATCGTTAA 564 0.3706 MDATSEVMNQFDESMKKQIALLLKVVLLNKSLKEDNVPCEIDQGLFLGSVGSAANKVALKNVNVTHILTVAGKIAPAYPADFVYKVIDVADKEDTNLKQYFNECFDFIDEAKRNGGYVLVHCYAGRSRSVTIIVAYLMKSRGMSLSEALQHVKNKRPQAAPNRGFIRQLEDFEKSLQGENCISLKYR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04664 187 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 32 178 - -
Trre15g04664 187 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 179 IPR029021 -
Trre15g04664 187 Pfam Dual specificity phosphatase, catalytic domain 45 174 IPR000340 GO:0008138|GO:0016311
Trre15g04664 187 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 99 157 IPR000387 GO:0016311|GO:0016791
Trre15g04664 187 ProSiteProfiles Dual specificity protein phosphatase domain profile. 37 178 IPR020422 GO:0006470|GO:0008138
Trre15g04664 187 CDD DSP 38 171 - -
Trre15g04664 187 FunFam Dual specificity phosphatase 12 39 187 - -
Trre15g04664 187 Gene3D Protein tyrosine phosphatase superfamily 31 183 IPR029021 -
Trre15g04664 187 SMART dsp_5 37 175 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04664 Trre-Chr15 57345620 57348197 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04664 40 178 Protein tyrosine phosphatase (PTP) family AT3G06110 61.151 2.18e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04664 - - lang:109352945 259.61