Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04657 ATGTTTTCAAAACATTTTGCTACTATCTTCTTCTTGGTCTTCCTCTCTCTCACATCTCACTCAATTGCAGCAGACACCACCTCCTGGATAAAAGCAGGTTATTACTATTCAGGCAGTGAAATTTCAGCTTCAGACATTAAATCCACACTCTTCACACACCTCTTATGTGCTTTTGCTTTTATAAATTCCACAAATTACAACATCTTCATAAACTCTTCTGAGGAACACAAATTCTCCATTTTCACTGACACAGTACAGCTTCAAAACCCATCTGTTACAACTCTTTTATCAATCTACACCGGAAGAGAAAACTCTTCACTTTTTGACTCACTGATAAACCAATCTTCTTATAGAAAATCTTTCATTGATTCTTCCATTAATACAGCAAGAAAATATGGATTTCATGGCATAGACCTTTGTGGTGTCTTACCAAAACAAGGTAAAGAAGTTGAAAATTTGGCAACCCTTTTGAAAGAGTGGCGAATTGCGATTACTTCTGAAGCAAGAAACAGTAAAAAATTAAAGTTAGTGTTAGTGATGGCAGGTTATTATATCAAAGCTTCAGATTCCATTAATTACCCTTTTGAATCAATGCAGAAGAATTTGGATTGGGTTCATTTTGTTGCATATGATTATTATCTTCCTAAAAGGGACAGTGTCACAGGTTTTCATGCAGCTTTGTATGGTTTATCTGGTTGGGATAATACTGATTCTGGTATCAAAGAATGGAGAAAAAGAGGATTTTCTTCTAACAAACTTGTAATTGGTTTGCCTTATCATGGATTTGCATGGACACTTGTGAAACAAGGTGAAGGTGGTGTTGGAAAAGCAGCTTCTGGACCTGCTATTACATTGGATGGTTCAATGGCTTATAAGTTGATAAAAAGTTATATTAGAAGTTTTGGTGATGGAGTAGTTTCATGTTATAATGATACTTTTGTGGTGAATTATTTCACAGTTGCACCCACTATTTGGATTAATTTTGATGATGTGGAAGCTATTAAAGAAAAAGTTTCTTATGCAAAGAAAAATGGATTTCTTGGTTACAATGTTTTCCAAGTTGGGAATGATGAGAATTGGGTCCTTTCCAAGGCAGCTCATGAAGTATATGGAGACCATCATAGCAGAAGGTTGCTGATAATTGTTCTGCTTATTACTTTGACTATTGCACTTCTCTTGGGAATAATAGTATTTTGCTACTACCACCAAGGAACAGTGATCACTATTAGAAGAATGATATACAAACCGAGGATATATTTATCAGCAGCTGAAGAAGATCTTTATGGAAATGGTTCTGATTTAATAATATTTGGTTATCTCACAATTAAATTAGCAACAAATAACTTCTCAGAAGAAAATAAGCTAGGAGAGGGTGGATTTGGTGCAGTGTACAAGGGAAAATTACGGAAGGGACAGGAAATAGCGGTCAAAAGACTATCAGAAACCTCAAATCAAGGACTTGAAGAGTTCAAAAATGAGATCGCGCTTACAGCAAGACTACAACATGTGAATTTAGTTAGACTTTTGGGTTACTGCACAAAAAATAATGAGAAGCTTCTCATCTATGAATATCTCCCAAACAAAAGCTTAGATCATTTTCTCCTGGATCCAAGGAAATCAATTCTTCTAGATTGGAAGAAGCGTGTGAATATCATCGAAGGGATTACTCAAGGTCTTCTTTATCTCCAAGAGTACTCAAATTTCATTATAATCCACCGAGATCTTAAAGCTAGTAATGTTTTATTAGGCCATGCCATGAATCCTAAGATATCAGATTTTGGTATGGCTAGAATTTTCGGAAAATATGAACTTGAAGCAAACACAAGCAAGATCGTGGGAACATATGGGTACATACCCCCTGAGTATGTGAGAAAAGGCATATACTCACCCAAATACGACGTTTATAGTTTTGGAGTCCTTCTTTTGCAAATCATAAGTGGAAAGAAAACTTCACGTTATTATGGTCCACATGAAAATATGAACCTTTTGGAATACGCATATGAGCTATGGATGGAAGGAAGGGGTGCGGAGTTTTTCGACCCTTCATTAGATGATACGACGTCACCTTGCAAAATAATGAGATGCATGCAGATAGCTCTTTTGTGTGTTCAAGAGAACTCAGCAGATAGACCTTCCATGTTAGAAGTTGATTCACTACTCAAGAATGAAGGTGCAGATGTTGGCACACCCAACGTGCCCGCTTTTTCGATGAAAAAACAGGTAGATGATAAGGGACATACAACGAAGTCCAAGTTCAAATTTTCTTCGATTAATGATGTTACAATTTCTCAGATGGTACCAAGATAA 2307 0.3619 MFSKHFATIFFLVFLSLTSHSIAADTTSWIKAGYYYSGSEISASDIKSTLFTHLLCAFAFINSTNYNIFINSSEEHKFSIFTDTVQLQNPSVTTLLSIYTGRENSSLFDSLINQSSYRKSFIDSSINTARKYGFHGIDLCGVLPKQGKEVENLATLLKEWRIAITSEARNSKKLKLVLVMAGYYIKASDSINYPFESMQKNLDWVHFVAYDYYLPKRDSVTGFHAALYGLSGWDNTDSGIKEWRKRGFSSNKLVIGLPYHGFAWTLVKQGEGGVGKAASGPAITLDGSMAYKLIKSYIRSFGDGVVSCYNDTFVVNYFTVAPTIWINFDDVEAIKEKVSYAKKNGFLGYNVFQVGNDENWVLSKAAHEVYGDHHSRRLLIIVLLITLTIALLLGIIVFCYYHQGTVITIRRMIYKPRIYLSAAEEDLYGNGSDLIIFGYLTIKLATNNFSEENKLGEGGFGAVYKGKLRKGQEIAVKRLSETSNQGLEEFKNEIALTARLQHVNLVRLLGYCTKNNEKLLIYEYLPNKSLDHFLLDPRKSILLDWKKRVNIIEGITQGLLYLQEYSNFIIIHRDLKASNVLLGHAMNPKISDFGMARIFGKYELEANTSKIVGTYGYIPPEYVRKGIYSPKYDVYSFGVLLLQIISGKKTSRYYGPHENMNLLEYAYELWMEGRGAEFFDPSLDDTTSPCKIMRCMQIALLCVQENSADRPSMLEVDSLLKNEGADVGTPNVPAFSMKKQVDDKGHTTKSKFKFSSINDVTISQMVPR 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04657 768 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 299 764 - -
Trre15g04657 768 CDD STKc_IRAK 455 722 - -
Trre15g04657 768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 570 582 IPR008271 GO:0004672|GO:0006468
Trre15g04657 768 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 373 IPR001223 GO:0005975
Trre15g04657 768 Gene3D - 259 328 IPR029070 -
Trre15g04657 768 Pfam Protein tyrosine and serine/threonine kinase 452 717 IPR001245 GO:0004672|GO:0006468
Trre15g04657 768 Gene3D Glycosidases 44 358 - -
Trre15g04657 768 SMART serkin_6 449 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g04657 768 Gene3D Phosphorylase Kinase; domain 1 426 524 - -
Trre15g04657 768 ProSiteProfiles Protein kinase domain profile. 449 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g04657 768 ProSitePatterns Protein kinases ATP-binding region signature. 455 477 IPR017441 GO:0005524
Trre15g04657 768 Pfam Glycosyl hydrolases family 18 34 357 IPR001223 GO:0005975
Trre15g04657 768 SUPERFAMILY (Trans)glycosidases 30 373 IPR017853 -
Trre15g04657 768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 525 727 - -
Trre15g04657 768 SUPERFAMILY Protein kinase-like (PK-like) 434 718 IPR011009 -
Trre15g04657 768 Gene3D Transferase(Phosphotransferase) domain 1 525 728 - -
Trre15g04657 768 FunFam Uncharacterized protein 426 524 - -
Trre15g04657 768 SMART 2g34 29 357 IPR011583 GO:0008061
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04657 Trre-Chr15 57288753 57292077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04657 437 768 Receptor kinase-like Gene Family AT4G11530 50.742 1.72e-110 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre15g04657 Glyco_hydro_18 2.5e-50 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04657 - - tpra:123922687 1357.81