Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04633 ATGGCGTTTGATCAAAATTCTGTTCCAAAGGATCTGCGCGTATTGAATGTGGCTCCAATAATGGTGGAGGAGACTCTCATTTCGCCTGCAAGCGTCACCTCGCCTCCGACTCCTGATTCAGCTTCCGATTATTTCTATCCTGCTTCAGCCTCCGCGTCAGCAACCTGGTGTGTCCGCCCTATTGTGAGTCCTCCTTCTATTGGATTAAACTATGGTTCCGGTTTTGGGAACCGTGTTATGGCTGGAAATGCATTGAATTTGGGAAATTGGGTAGGGACTAGTACTAGTAGTAATAATAATAATAATAGCAATAATGCTTTGCATTGTAATGATGGTGTTAATGTGAATGTAAGTGGTTTTTCTTATGGTGGTCATGGTGGAAATAGAGCGGTTGATGATGCCGGTGATGATTCGAATTCGGGTAGGAAAGTTAAATTTTTGTGTAGTTTTGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGTGTGTTGAGATATGTTGGAGGGCAGACAAGGATAATTAGTGTTAGGAGAGATGTGAGTTTTAACGATTTGGTCCAAAAAATGGTAGATACTTATGGACAACCTGTGGTTATTAAATATCAGTTACCGGAGGAGGATCTTGATGCGTTGGTTTCCATTGCTTGTCCTGATGATGTTGAGAATATGATGGAGGAGTATGGAAAATTGGTTGAGAGATCTCCTGATGGTTCTGCTAAATTGAGGGTTTTTTTGTTTCCTATGTCAGAGGTTGATATTTCTAGTGCAGCGCAGGTCGGAGATTTGCAGGATACCGGGCAGAAATATTTTGATGCTGTGAATGGTATTGTAGATGTGAATGGGGTTTCTGTTGGGTTCAAGAGGAAAGAGAGTGTTACAAGTGCAGCTTCAACACAAAATTCTGATTTGAGTGGGATAGAGACTATTGATAGCTCTCTTGCCGGTCAAGGGGATTCATCGCCCTGCATGTTATCGCCTAGAGAGTATGTAGCTACTTCTCCAGACACAAATGCACATTTTCTGGTTTCTGAGTCCAGTACACCGGTATACTCAGGTGCTTCTCCTGTTTCATTTGGCACGCCTGTGACTAAGACCGGTCCAACATACCCTTCGTATATGCAGAATGAGATCGAGTTAGAAAAGCCTGTTCCTGTTACTTTGTCCCAGCAACCATTTGAATTGCATCAATCAAGAATGGAAATTCCATCTTCACCTTATTTGAACCACGGAGAGTATGTTCATCTGCCTCCCCAGATGGGGTTCCCAAATCCTCACCTTTTAGGAAAGACGGGGCCTGTTTTCGCCCAACAACAGTTTCATAGTAATGCTTCTGGATTAGCTTACCATCAGGCTATCCCCGGAGCACAAATGACAATGACTCAACCTTCTTCTCGTCTTGGTATAAGACCAAATCTCATCCAGCCACAACCATTGATACAAACACAACATAATCATCTGAACCAATATAGTGATGAAAATACATCAGGAATAAGGATTGTCCAGCTTCCTTCCGAACACAACTACAATACATATCAGTTTCCAGTAAATCAAGTTCCTGTGAATCAAGTTCCATCTGTCATAGTTGGGGGTAATCGTGGTTGGGTTCAGGTTCCTCCACAACAACACGAGCATGGGTTATCACCTCAACAACAAGTAATTAACTCAGAGCAAATCCTTAGAGCCAAGGGATGTTCTATGTGTCAGAAAAAGCTGCCTCACGCCCATTCAGATCCAGTGGTTCAGGATCAACATGATGGAATTTCAGGTCCAGTTCCTGATTCACGCCCAAGTTACAATAGTTTTCCGTTGGAGGACACTGTAAAAGCTCAAGCTACAAAGAGGGTTGAGTCTATGGTGGCATCACCCTTAAAGGAAGGCATTGTTGAACAAGGGTATAGCACAAGGCCAAGTGTCATTAGCAACTTGAAAGCTCATAATGGAGCAAGACCTTGTACTGATAATACTGTGATTTCTCATAATTTTGAGCCTCAGAATGAAGGTGGGATGATTTTTATACAAAATCCAAAAGAATTTGACCATCCCATGAATTCTTGTATCCAAGAAACAATTGGCAGGATAGGTGAAAAACATTCTTCTGGAGATGGACTTGGGGCCACGGGAACACCACCATCATCTTATCCAGATGATGTTGTCCGCCAGCATACGACGCCGGTTGAAATCTGGGTTAAACAAGATGATCTTGTGAATAAACATGTCAATAATGATATACCTAGAGTTGATGGAACGCCTATACATACTTCAGAGTGCTCCTCTCAAGGATCTCCCAAAGAATACACTAATGAGCTTACTGGTGTCATTTCAAAATCAGATGCAGTAGATAATTGGATTAGACAGGGATATCTAAGACCTGTTGATGGAAGGAATGACACACTCAAGATTAACATGGCAGAAGGTTATGTAGGTGATGATCAATGCTTGCTTCCAGTTGATAAATCATTAGATTACAACAGCCAGATTGCTGCAGAGGAAGAGGTGATTCTGGATAACAACTTTGGCACATCAAAATTGATAGTTGACGCAAATAAAATTAAGATGATAGCTTTGCAGCCATGTTCTTCTAAGGAAACTTCATTCAGGCACAATTCCAGGATAGGGGAATACAATGATGTTGTACAATCACCTGTGTTGGACGTTACTCAATCAAAGATTTTAAACCATCACAAGGATGATTCAACATCATCTACATCATCACCATCTTTCTTGTTTGGGGATATGCAGGATTCTCCAAACTCAGTTTTCGGCAATCAGGATCCTTGGAATATACAACATGGTACCTTCTTTCAACCTTCTGTTCTGAGCAAAGTTACATCGGAGAAAGAAACCTATTTTCATAAGGATTACTTTGGTGAAAATCCAGGAACCTACAAGAAATCAAATTTGGATGCACAATTGGATGGTGACCTCTACGAGTCATTCAAACATAATGGTTGGTGTGACAAAGGTTCAACCGAAGATCAACAACTTAAAGTTGTTGCTGAAGACGTAGCAGCTTCTGTTCTGCACCCATGTGTTCCTTCAAATCCTAACTTGCAAGCTGAAGACGTTTCCTGTCAGAAAAACATCGAGGATGGTATTGTTCAAAATAATCTAATACATGCGAAGTGTAGAGATATAACTCAGGATGTCAAGAGTAACCTACCAGAGAAGGGAAATTTTGGCTTTCCGACATCGGGTGTTGGACGTTTGCAGATTATAAAGAACTGTGACCTTGAAGAGCTGACAGAATTGGGTTCTGGTACCTTTGGGACTGTTTATCATGGAAAATGGAGGGGAACTGATGTTGCAATTAAACGAATAACTGATAGATGTTTTGCTGGAAAGCCTTCGGAACAAGAGCGCATGAGAGACGACTTCTGGAATGAGGCAATCAAGCTTGCTGACTTGCATCATCCTAATGTGGTTGCTTTCTATGGTGTTGTGCTTGATGGCCCCGGAGATTCCATGGCAACAGTAACTGAGTACATGACTAATGGTTCTCTCAGAAATGCCCTGCAAAAGAATGAGAGGAATCTAGACAAGCGCAGACGTCTTATGATTGCAATGGATGTGGCCTTTGGAATGGAATACCTGCATGGAAAAAATATAGTACACTTTGACTTGAAAAGCGACAACTTGCTTGTGAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACTTGGGTCTATCCAAAGTAAAATGTCAGACACTGATCTCCGGAGGTGTGAGAGGAACTCTACCATGGATGGCTCCAGAGCTACTGAACGGAAGCAGTAGCCTTGTTTCAGAGAAGGTTGATGTGTTTTCATTCGGTATTGTGATGTGGGAACTCTTAACTGGCAATGAGCCATATGCTGATCTGCACTATGGTGCTATTATAGGTGGTATTGTGAGCAACACTTTGCGCCCTTCAATTCCCGAATCATGTGATCCGGAATGGTGTGTGTTGATGGAAAGATGTTGGGCCTCAGAACCATCGGAGAGACCCAACTTCACTGACATTGCTGATGAATTACGTTCTATGGCAACCAAACGCCAAAATCAACAGCTACAACCCTCTCATTTGCACACACAAATCAACAAATGA 4089 0.4221 MAFDQNSVPKDLRVLNVAPIMVEETLISPASVTSPPTPDSASDYFYPASASASATWCVRPIVSPPSIGLNYGSGFGNRVMAGNALNLGNWVGTSTSSNNNNNSNNALHCNDGVNVNVSGFSYGGHGGNRAVDDAGDDSNSGRKVKFLCSFGGKILPRPSDGVLRYVGGQTRIISVRRDVSFNDLVQKMVDTYGQPVVIKYQLPEEDLDALVSIACPDDVENMMEEYGKLVERSPDGSAKLRVFLFPMSEVDISSAAQVGDLQDTGQKYFDAVNGIVDVNGVSVGFKRKESVTSAASTQNSDLSGIETIDSSLAGQGDSSPCMLSPREYVATSPDTNAHFLVSESSTPVYSGASPVSFGTPVTKTGPTYPSYMQNEIELEKPVPVTLSQQPFELHQSRMEIPSSPYLNHGEYVHLPPQMGFPNPHLLGKTGPVFAQQQFHSNASGLAYHQAIPGAQMTMTQPSSRLGIRPNLIQPQPLIQTQHNHLNQYSDENTSGIRIVQLPSEHNYNTYQFPVNQVPVNQVPSVIVGGNRGWVQVPPQQHEHGLSPQQQVINSEQILRAKGCSMCQKKLPHAHSDPVVQDQHDGISGPVPDSRPSYNSFPLEDTVKAQATKRVESMVASPLKEGIVEQGYSTRPSVISNLKAHNGARPCTDNTVISHNFEPQNEGGMIFIQNPKEFDHPMNSCIQETIGRIGEKHSSGDGLGATGTPPSSYPDDVVRQHTTPVEIWVKQDDLVNKHVNNDIPRVDGTPIHTSECSSQGSPKEYTNELTGVISKSDAVDNWIRQGYLRPVDGRNDTLKINMAEGYVGDDQCLLPVDKSLDYNSQIAAEEEVILDNNFGTSKLIVDANKIKMIALQPCSSKETSFRHNSRIGEYNDVVQSPVLDVTQSKILNHHKDDSTSSTSSPSFLFGDMQDSPNSVFGNQDPWNIQHGTFFQPSVLSKVTSEKETYFHKDYFGENPGTYKKSNLDAQLDGDLYESFKHNGWCDKGSTEDQQLKVVAEDVAASVLHPCVPSNPNLQAEDVSCQKNIEDGIVQNNLIHAKCRDITQDVKSNLPEKGNFGFPTSGVGRLQIIKNCDLEELTELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRDDFWNEAIKLADLHHPNVVAFYGVVLDGPGDSMATVTEYMTNGSLRNALQKNERNLDKRRRLMIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGNEPYADLHYGAIIGGIVSNTLRPSIPESCDPEWCVLMERCWASEPSERPNFTDIADELRSMATKRQNQQLQPSHLHTQINK 1362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04633 1362 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 163 247 - -
Trre15g04633 1362 PANTHER SERINE-THREONINE PROTEIN KINASE 210 1341 - -
Trre15g04633 1362 Pfam PB1 domain 163 246 IPR000270 GO:0005515
Trre15g04633 1362 Gene3D Transferase(Phosphotransferase) domain 1 1164 1362 - -
Trre15g04633 1362 PRINTS Tyrosine kinase catalytic domain signature 1158 1171 IPR001245 GO:0004672|GO:0006468
Trre15g04633 1362 PRINTS Tyrosine kinase catalytic domain signature 1310 1332 IPR001245 GO:0004672|GO:0006468
Trre15g04633 1362 PRINTS Tyrosine kinase catalytic domain signature 1195 1213 IPR001245 GO:0004672|GO:0006468
Trre15g04633 1362 PRINTS Tyrosine kinase catalytic domain signature 1266 1288 IPR001245 GO:0004672|GO:0006468
Trre15g04633 1362 ProSitePatterns Protein kinases ATP-binding region signature. 1082 1113 IPR017441 GO:0005524
Trre15g04633 1362 MobiDBLite consensus disorder prediction 574 598 - -
Trre15g04633 1362 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1069 1163 - -
Trre15g04633 1362 ProSiteProfiles Protein kinase domain profile. 1076 1343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g04633 1362 SUPERFAMILY CAD & PB1 domains 159 252 - -
Trre15g04633 1362 SUPERFAMILY Protein kinase-like (PK-like) 1069 1337 IPR011009 -
Trre15g04633 1362 Gene3D - 164 246 - -
Trre15g04633 1362 CDD PB1_UP2 147 245 - -
Trre15g04633 1362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1201 1213 IPR008271 GO:0004672|GO:0006468
Trre15g04633 1362 SMART PB1_new 158 247 IPR000270 GO:0005515
Trre15g04633 1362 MobiDBLite consensus disorder prediction 739 763 - -
Trre15g04633 1362 CDD STKc_MAP3K-like 1082 1339 - -
Trre15g04633 1362 SMART serkin_6 1076 1342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g04633 1362 MobiDBLite consensus disorder prediction 693 713 - -
Trre15g04633 1362 Gene3D Phosphorylase Kinase; domain 1 1070 1163 - -
Trre15g04633 1362 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1164 1355 - -
Trre15g04633 1362 Pfam Protein tyrosine and serine/threonine kinase 1079 1339 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04633 Trre-Chr15 57085112 57092123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04633 68 613 MAP Kinase Kinase Kinase AT3G46920 36.204 2.22e-77 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Trre15g04633 PK_Tyr_Ser-Thr 7.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04633 - - mtr:11439273 2193.7