Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04621 ATGGGTTATCAAAAGCCTGCATGGTTGGAAGCTCTTTATACAGAAAAGTTCTTTGTTGGTTGTTCTTATCATGAGAATGCAAAAAAGAATGAGAAGAATGTTTGTTGTTTAGATTGTTGCACAAGTATTTGTCCTCATTGTTTACCGTCTCATCGCTATCACCGACTTCTTCAAGTTCGCCGATATGTTTATCATGATGTTGTTAGATTGGAAGATCTTGAGAAACTTATTGATTGCACCAATGTTCAGGCCTATACTATCAATAGTGCCAAAGTGGTGTTCATCAAGAAAAGACCTCAAAACCGCCAATTCAAAGGATCAGGAAACTATTGTACATCATGTGATAGAAGCCTTCAAGAACCTTTTATCCATTGTTCTCTTGGATGCAAGGTGGATTTTGTGCTGAAACATTACAAGGACCTTTCACCCTTCTTAAGGATATGCAACACCTTACAATTAAGTCCTGACTATCTCATTCCACAAGAAATGGGGGATGAATTAGAGATGACAAGATCAACAATTGTGGATTGTGATGAACAAATGAGTTCATATTCAGGATCATCATCAGGATCAGAGAATATGAGCATGATGGCATGCACAGAAATTGTTAGGAAAAGAAGAAGTGGATGGACAAGTATGTGTGCAAAATTCATGGCCAATAATAATATCAATAAAGTTTCTGATGAAGACATGGCTACAATTTTGATTAGTAGAAGAAAAGGAATCCCTCATAGATCTCCTCTATGTTAG 750 0.368 MGYQKPAWLEALYTEKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRYHRLLQVRRYVYHDVVRLEDLEKLIDCTNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPFLRICNTLQLSPDYLIPQEMGDELEMTRSTIVDCDEQMSSYSGSSSGSENMSMMACTEIVRKRRSGWTSMCAKFMANNNINKVSDEDMATILISRRKGIPHRSPLC 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04621 249 Pfam PLATZ transcription factor 60 131 IPR006734 -
Trre15g04621 249 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04621 Trre-Chr15 56906438 56908362 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre15g04621 PLATZ 8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04621 - - gmx:100785737 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04621 15 56906438 56908362 Trre15g04621 15 56906438 56908362 ECH