Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04620 ATGATCATGGGTTATCAAAAGCCTGCATGGTTGGAAGCTCTTTATACAGAAAAGTTCTTTGTTGGTTGTTCTTATCATGAGAATGCAAAAAAGAATGAGAAGAATGTTTGTTGTTTAGATTGTTGCACAAGTATTTGTCCTCATTGTTTACCGTCTCATCGCTATCACCGACTTCTTCAAGTTCGCCGATATGTTTATCATGATGTTGTTAGATTGGAAGATCTTGAGAAACTTATTGATTGCACCAATGTTCAGGCCTATACTATCAATAGTGCCAAAGTGGTGTTCATCAAGAAAAGACCTCAAAACCGCCAATTCAAAGGATCAGGAAACTATTGTACATCATGTGATAGAAGCCTTCAAGAACCTTTTATCCATTGTTCTCTTGGATGCAAGGTGGATTTTGTGCTGAAACATTACAAGGACCTTTCACCCTTCTTAAGGATATGCAACACCTTACAATTAAGTCCTGACTATCTCATTCCACAAGAAATGGGGGATGAATTAGAGATGACAAGATCAACAATTGTGGATTGTGATGAACAAATGAGTTCATATTCAGGATCATCATCAGGATCAGAGAATATGAGCATGATGGCATGCACAGAAATTGTTAGGAAAAGAAGAAGTGGATGGACAAGTATGTGTGCAAAATTCATGGCCAATAATAATATCAATAAAGTTTCTGATGAAGACATGGCTACAATTTTGATTAGTAGAAGAAAAGGAATCCCTCATAGATCTCCTCTATGTTAG 756 0.3677 MIMGYQKPAWLEALYTEKFFVGCSYHENAKKNEKNVCCLDCCTSICPHCLPSHRYHRLLQVRRYVYHDVVRLEDLEKLIDCTNVQAYTINSAKVVFIKKRPQNRQFKGSGNYCTSCDRSLQEPFIHCSLGCKVDFVLKHYKDLSPFLRICNTLQLSPDYLIPQEMGDELEMTRSTIVDCDEQMSSYSGSSSGSENMSMMACTEIVRKRRSGWTSMCAKFMANNNINKVSDEDMATILISRRKGIPHRSPLC 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04620 251 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 6 250 - -
Trre15g04620 251 Pfam PLATZ transcription factor 62 133 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04620 Trre-Chr15 56906438 56908368 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Trre15g04620 PLATZ 8.1e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04620 - - gmx:100785737 459.914