Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04614 ATGTTGAAAGTGAAGGGAGGAACAAGACCACCATGGGTAGGACTAGGAGCTGCAGTATGGGTACAAATAGCAGTAGGAAATGCTTACACATTCCCACTTTATTCACCTTCTTTCAAATCTGTTCTTGGTTTCAATCAAAGTCAAGTTACTCTTCTTGGTGTTGCTAATGATATTGGTGAAAATGTTGGTCTTCTTCCTGGTATTGTTTGTAACAAATTCCCTCCTTGGCTTATGCTTTTCATTGGTGCTCTTTTCTCTTTCCTTGGTTTTGGTCTTCTTTGGCTCTCTGTCTCTCAAACACTTCCTTCCCTTCCTTATCCTTTGCTATGGTTTGCACTTGCTATTGCTACAAACAGTTGTGCATGGTTAACAACTGCCATTCTTGTGACAAACATGAGAAATTTCCCTGTCAGTAGAGGAACAGTTGCAGGAATATTGAAAGGTTATGGAGGGATCAGTGGTGCAGTTTTCACCGAAATCTACAGGGCACTTCTTCATAATTCTTCTTCTAATTTCCTCTTGTTTCTTGCTGTTGGCATTCCTGTTTTGTGCTTCACTGTCATGTTTCTCATTCGTCCTTGTACACCGGTTTCTGGCGAGAATTCTTCAGAAAAATGGCATTTTCTTTTCATTCAATGTTCAAGTGTGGCTTTAGGTGTATATTTACTTGTGACAACTACACTTGATTATATTCTTCACATAAATTCCACTGTGTCTTATGCTTTGGTGACTTTGATGATTCTTCTTCTCATGGCTCCTCTTGCTATCCCTATAAAGATGACACTGTTTCCTCAAAAAGTCGATGAATCAGAAGTAAATGAGCAAAGTGAAGGCAAAGAAATCACAAAACCCCTTTTACAATCTTCGTCGGCTACTGCACTTGGTAGTTTCTCCGACGCTGGTGGTTTATCTGAGGTTGATTTACTTCTTGCTGAGGGTGAAGGAGCAGTAGTACCTTCAAAAAAGAGAAGGCCTAGAAGAGGGGAAGATTTTACATTCACCGAGGCATTGGTTAAGGCTGATTTCTGGCTGTTATTTTTTGTATACTTTGTCGGTGTCGGAACTGGTGTTACTGTTATTAATAATCTGGCTCAAGTAGGTGCTGCTCAAGGTGTTGAAGATATCACCATCTTACTCTCGGTTTTCAGTTTTTTCAATTTTATTGGCCGACTTGGTGGAGGAGTTGTTTCTGAACATTTTGTCAGGACGAAAACGATCCCAAGGACGGTTTGGATGACATGCACACAAATAGTTATGATAATCCTGTACCTTCTGTTAGCACATGCCATCGAAGGAACACTTTATCCAGCAGTTGGATTTCTTGGCATCTGCTATGGAGTTCAATTTTCCATATTGATTCCAACAGTTTCAGAGCTTTTTGGTTTGAAGCACTTCGGATTATTTTTCAACTTCATGTCATTAGGTAATCCACTTGGTGCATTACTTTTCTCGGCTCTTCTAGCAGGCCGTATATATGACAACGAATTGGCAAGGCAACAAGGTTTTGGTCTCATTGCTTCAAGTATTTCGTGTGTTGGTCCTGATTGTTTTAAGGTCACCTTTTTAGTACTTGCTGCTGTTTGTGTTGCCGGTACCATTTCGAGCATTATCTTGACTATGAGAATTAAGCCTGTTTATCAAATGCTTTACGCCGGTGGTTCTTTTAGGTTACCTCAAATGTCAGTCCAATAA 1692 0.4013 MLKVKGGTRPPWVGLGAAVWVQIAVGNAYTFPLYSPSFKSVLGFNQSQVTLLGVANDIGENVGLLPGIVCNKFPPWLMLFIGALFSFLGFGLLWLSVSQTLPSLPYPLLWFALAIATNSCAWLTTAILVTNMRNFPVSRGTVAGILKGYGGISGAVFTEIYRALLHNSSSNFLLFLAVGIPVLCFTVMFLIRPCTPVSGENSSEKWHFLFIQCSSVALGVYLLVTTTLDYILHINSTVSYALVTLMILLLMAPLAIPIKMTLFPQKVDESEVNEQSEGKEITKPLLQSSSATALGSFSDAGGLSEVDLLLAEGEGAVVPSKKRRPRRGEDFTFTEALVKADFWLLFFVYFVGVGTGVTVINNLAQVGAAQGVEDITILLSVFSFFNFIGRLGGGVVSEHFVRTKTIPRTVWMTCTQIVMIILYLLLAHAIEGTLYPAVGFLGICYGVQFSILIPTVSELFGLKHFGLFFNFMSLGNPLGALLFSALLAGRIYDNELARQQGFGLIASSISCVGPDCFKVTFLVLAAVCVAGTISSIILTMRIKPVYQMLYAGGSFRLPQMSVQ 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04614 563 CDD MFS_Mch1p_like 10 532 - -
Trre15g04614 563 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 12 547 - -
Trre15g04614 563 SUPERFAMILY MFS general substrate transporter 251 543 IPR036259 -
Trre15g04614 563 Gene3D MFS general substrate transporter like domains 338 546 IPR036259 -
Trre15g04614 563 Pfam Nodulin-like 11 258 IPR010658 -
Trre15g04614 563 Gene3D MFS general substrate transporter like domains 1 195 IPR036259 -
Trre15g04614 563 SUPERFAMILY MFS general substrate transporter 13 195 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04614 Trre-Chr15 56820287 56823322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04614 2 559 Nodulin-like Gene Family AT1G80530 58.688 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04614 - - gmx:100787328 813.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04614 15 56820287 56823322 Trre15g04614 15 56820287 56823322 ECH
Trre15g04614 15 56820287 56823322 Trre3g03292 3 41189192 41192534 PCT