Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04593 ATGGGAGCTGTAATTCTCCCAGATCTCGGTACTGAGATTTTGATTCCTGCTTGTGCTGTCATTGGAATCGTTTTTGCTCTTTTCCAATGGCTTCTCGTTTCCAAAGTTAAGCTCACTGCTGGTATTGACTCTTCTTCTGAACCTCCCCCTAAAAATGGTTACAACGATTCACTCATCGAAGAAGAAGAAGGTATCAACGACCATAACGTTGTTCTTAAATGTGCTGAAATCCAGAACGCTATCTCCGAAGGGTCAACCTCCTTCCTTTTCACCATGTACAAGTATGTTGGAATCTTCATGGTGGCTTTTGCCATTTTGATATTCCTCTTCCTTGGCTCCGTGGAAGGATTCAGCACTAGCCACCAGCCTTGCACTTACGATGAAACTAAGATGTGCAAGCCAGCTCTTGCCACAGCCCTTTTCAGCACCATATCTTTCGTCCTTGGTGGCATTACATCAGTTATTTCTGGTTTCCTTGGAATGAAGATCGCAACTTACGCCAATGCAAGAACTACCTTGGAGGCAAGAAAGGGTGTTGGAAAGGCTTTCATTACCGCATTCAGATCAGGTGCAGTTATGGGATTTCTCCTTGCTGCAAATGGTCTTTTGGTTCTTTTCATTACCATCAACCTGTTCAAGATTTACTATGGTGATGACTGGGGTGGTCTTTTTGAGGCTATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATCTATACCAAGGCTGCTGATGTTGGTGCCGATCTTGTTGGCAAGGTTGAGAGAAACATTCCCGAGGATGATCCAAGAAACCCAGCTGTCATTGCTGATAATGTCGGTGATAATGTTGGTGATATTGCCGGTATGGGATCCGATCTATTTGGCTCATATGCAGAGGCATCTTGTGCTGCCCTTGTTGTTGCTTCCATCTCTTCTTTTGGAGTGAATCATGAGTTCACCCCCATGTTGTTCCCTCTCATCATCAGTTCTGTGGGTCTCCTTGTTTGTTTGCTCACCACCTTATTTGCAACTGACTTTTTTGAGATCAAACTTGTAAAGGAAATTGAGCCAGCATTGAAAAAACAGCTCGTTATTTCAACAGCACTTATGACAATTGGAATTGCAATTGTTAGTTGGATTGCACTTCCATCTACATTCACCATCTTCAATTTCGGAGAGCAGAAAGTTGTCAGGAACTGGCAACTATTCTTGTGTGTTGCTGTTGGTCTTTGGGCAGGGCTTATCATTGGATTTGTTACTGAATACTATACCAGCAATGCATACAGTCCTGTGCAAGATGTTGCAGACTCCTGCAGGACTGGTGCTGCTACCAATGTTATATTTGGCCTTGCATTGGGGTACAAGTCTGTTATCATTCCGATTTTTGCCATTGCAGTCAGTATTTTTGTTAGTTTCAGTTTTGCTGCCATGTACGGTGTTGCTGTTGCTGCACTTGGAATGTTGAGTACCATCGCCACCGGATTAGCCATCGATGCATACGGTCCAATCAGTGACAATGCCGGAGGTATTGCTGAGATGGCTGGAATGAGTCACAGAATCCGCGAGAGAACCGATGCCCTTGATGCTGCAGGAAACACAACTGCCGCTATCGGAAAGGGTTTTGCTATTGGTTCTGCTGCTCTTGTGTCTCTTGCCCTCTTCGGTGCCTTCGTGAGCCGAGCTGGTATTACGACAGTTGATGTGCTAACTCCCAAGGTTTTCATTGGTTTGCTTGTGGGTTCCATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTTGGAAGTGCAGCCCTTAAGATGGTTGAGGAAGTCCGCAGACAATTCAACACCATTCCTGGCTTGATGGAAGGAACTGCCAAACCTGACTATGCAACATGTGTTACTATCTCCACCGACGCATCTATCAAAGAAATGATCCCACCTGGTGCCCTTGTTATGCTAACACCCCTTATTGTTGGGATCTTTTTCGGTGTTGAAACACTGTCTGGTGTCCTTGCTGGATCTTTGGTTTCTGGTGTACAGATTGCCATCTCTGCATCCAACACTGGCGGTGCTTGGGATAACGCCAAGAAATACATTGAGGCTGGTGCCTCAGAGCATGCAAGAAGCCTTGGTCCAAAGGGGTCAGATCCACACAAGGCAGCAGTTATTGGTGACACCATTGGGGACCCATTGAAGGATACATCCGGACCATCACTCAACATCCTTATCAAACTGATGGCCGTCGAGTCTCTGGTGTTTGCTCCTTTCTTCGCAACCCACGGTGGTCTCCTCTTCAAAATCTGGTCATAA 2304 0.457 MGAVILPDLGTEILIPACAVIGIVFALFQWLLVSKVKLTAGIDSSSEPPPKNGYNDSLIEEEEGINDHNVVLKCAEIQNAISEGSTSFLFTMYKYVGIFMVAFAILIFLFLGSVEGFSTSHQPCTYDETKMCKPALATALFSTISFVLGGITSVISGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFITINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAEASCAALVVASISSFGVNHEFTPMLFPLIISSVGLLVCLLTTLFATDFFEIKLVKEIEPALKKQLVISTALMTIGIAIVSWIALPSTFTIFNFGEQKVVRNWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGVAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGITTVDVLTPKVFIGLLVGSMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVTISTDASIKEMIPPGALVMLTPLIVGIFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIWS 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04593 767 NCBIfam V-type H(+)-translocating pyrophosphatase 11 761 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Trre15g04593 767 PIRSF H+-PPtase 12 764 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Trre15g04593 767 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Trre15g04593 767 Pfam Inorganic H+ pyrophosphatase 21 751 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Trre15g04593 767 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 756 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04593 Trre-Chr15 56654415 56658614 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04593 5 629 Primary Pumps ATPases AT1G15690 87.420 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04593 K23025 - gmx:100775864 1407.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04593 15 56654415 56658614 Trre15g04593 15 56654415 56658614 ECH