LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre15g04581	ATGGCTTTTCCTCTTATTTCAAGAAATCCTACTTTCCACACATTTCCATCTCACACTCACCAATTCACCGCATCCTCTTCCTTCAGAACTAAATCTCTCTCCCTCCTCAATTTCGCAAAGATGGAAGGAAGTGAAATCACTGAACAAGTTGCAGGGAAAGTAGTGGAAGATGATGATTTGAGTTTGAAGAAGAAAGTTTTTGTTGCTGGTGCTACTGGTAGCACTGGGAAAAGAATCGTTGAACAGTTACTTGCAAAGGGTTTTGCTGTTAAGGCTGGTGTTAGAGATTTGGACAAGGCTAAGACCTCATTTTCCTCTACCAACCCTTCTCTTCAATTTGTTAAAGTTGATGTTACAGAGGGTTCTGATAAGCTAGCTGAAGCTATTGGCGATGATACAGAAGCAGTAGTATGTGCCACAGGCTTTCGGCCAGGGTGGGATTTGCTTGCTCCGTGGAAGGTTGACAATTTTGGCACTGTAAACCTTGTTGAAGCATGCAGGAAAGTCAACGTAAACAGATTCATTCTTATAAGCTCCATTTTAGTCAATGGAGCAGCTATGGGACAGCTACTCAATCCAGCTTACATCTTTCTCAACGTTTTCGGACTAACATTAGTAGCAAAGTTGCAGGCAGAAAATCATATCAGGAAATCTGGTATAAATTACACAATAATAAGACCTGGAGGGTTGAAAAACGATCCTCCTACCGGAAATATTGTTATGGAGCCAGAGGACACCCTTTATGAAGGTTCCATATCCAGAGATCAAGTTGCAGAGGTAGCTGTGGAATCATTGGCTTATCCCGAGTCATCTTATAAAGTTGTGGAGATAGTTGCTCGACCTGATGCTCCTAAGCGCGCATACCATGATCTTTTTGGTTCCATAGTTCAACGATGA	897	0.4203	MAFPLISRNPTFHTFPSHTHQFTASSSFRTKSLSLLNFAKMEGSEITEQVAGKVVEDDDLSLKKKVFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLDKAKTSFSSTNPSLQFVKVDVTEGSDKLAEAIGDDTEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKVNVNRFILISSILVNGAAMGQLLNPAYIFLNVFGLTLVAKLQAENHIRKSGINYTIIRPGGLKNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVESLAYPESSYKVVEIVARPDAPKRAYHDLFGSIVQR	298

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre15g04581	298	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	64	278	IPR036291	-
	Trre15g04581	298	Pfam	NAD(P)H-binding	70	266	IPR016040	-
	Trre15g04581	298	CDD	SDR_a5	65	280	-	-
	Trre15g04581	298	PANTHER	FLAVIN REDUCTASE-RELATED	42	296	-	-
	Trre15g04581	298	Gene3D	-	53	287	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre15g04581	Trre-Chr15	56543648	56546004	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre15g04581	63	195	Monolignol Biosynthesis Gene Families	AT2G33590	32.394	1.41e-07	50.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre15g04581	-		-	gmx:100792523	467.618