Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04545 ATGATGAGCATCCAAAGAAGGCCTTTCAATTTCTTTAGAAGAGAAACAGGTGAAAAAGATGTGACACTCAAAATATTGTATTGTGGGATATGTCACTCAGATGTCCACATGATGAAGAACGAATGGGGCATATCCACTTATCCACTAGTTCCTGGGCATGAGATTGTTGGTATAGTGACAAAAGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGAGATAATTATCGTGATGACACCACATATGGAGGTTACTCTGACTCACTAGTTGCAGACGAGCATTTTGTGGTTCACATTCCCGATGGTTTGCCACTTGATGCCGCGGCTCCTCTTCTTTGCGCCGGTATCACAGTGTATAGTCCTCTTCGATATTTTGGGCTCGACAAACCTGGTCAACATATAGGCGTTGTTGGTCTTGGTGGAGTTGGTCACATGGCTGTTAAGTTTGCCAAAGCTTTTGGTGCTAATGTGACTGTAATTAGTACATCACCTAACAAAGAAAAGGAAGCAATATAA 513 0.4191 MMSIQRRPFNFFRRETGEKDVTLKILYCGICHSDVHMMKNEWGISTYPLVPGHEIVGIVTKVGSKVEKFKVGDNYRDDTTYGGYSDSLVADEHFVVHIPDGLPLDAAAPLLCAGITVYSPLRYFGLDKPGQHIGVVGLGGVGHMAVKFAKAFGANVTVISTSPNKEKEAI 170
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04545 170 PANTHER ALDEHYDE REDUCTASE 77 170 IPR047109 GO:0016616
Trre15g04545 170 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 114 169 IPR036291 -
Trre15g04545 170 Gene3D - 7 74 - -
Trre15g04545 170 Gene3D - 77 112 - -
Trre15g04545 170 Pfam Alcohol dehydrogenase GroES-like domain 19 74 IPR013154 -
Trre15g04545 170 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 123 167 IPR006140 GO:0051287
Trre15g04545 170 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 52 66 IPR002328 GO:0008270|GO:0016491
Trre15g04545 170 SUPERFAMILY GroES-like 12 131 IPR011032 -
Trre15g04545 170 Gene3D - 113 169 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre15g04545 Trre-Chr15 56242261 56244710 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04545 8 170 Monolignol Biosynthesis Gene Families AT4G37990 62.121 5.49e-72 219
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04545 - K23232 pvy:116143840 251.521