Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre15g04545 | ATGATGAGCATCCAAAGAAGGCCTTTCAATTTCTTTAGAAGAGAAACAGGTGAAAAAGATGTGACACTCAAAATATTGTATTGTGGGATATGTCACTCAGATGTCCACATGATGAAGAACGAATGGGGCATATCCACTTATCCACTAGTTCCTGGGCATGAGATTGTTGGTATAGTGACAAAAGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGAGATAATTATCGTGATGACACCACATATGGAGGTTACTCTGACTCACTAGTTGCAGACGAGCATTTTGTGGTTCACATTCCCGATGGTTTGCCACTTGATGCCGCGGCTCCTCTTCTTTGCGCCGGTATCACAGTGTATAGTCCTCTTCGATATTTTGGGCTCGACAAACCTGGTCAACATATAGGCGTTGTTGGTCTTGGTGGAGTTGGTCACATGGCTGTTAAGTTTGCCAAAGCTTTTGGTGCTAATGTGACTGTAATTAGTACATCACCTAACAAAGAAAAGGAAGCAATATAA | 513 | 0.4191 | MMSIQRRPFNFFRRETGEKDVTLKILYCGICHSDVHMMKNEWGISTYPLVPGHEIVGIVTKVGSKVEKFKVGDNYRDDTTYGGYSDSLVADEHFVVHIPDGLPLDAAAPLLCAGITVYSPLRYFGLDKPGQHIGVVGLGGVGHMAVKFAKAFGANVTVISTSPNKEKEAI | 170 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre15g04545 | 170 | PANTHER | ALDEHYDE REDUCTASE | 77 | 170 | IPR047109 | GO:0016616 | |
Trre15g04545 | 170 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 114 | 169 | IPR036291 | - | |
Trre15g04545 | 170 | Gene3D | - | 7 | 74 | - | - | |
Trre15g04545 | 170 | Gene3D | - | 77 | 112 | - | - | |
Trre15g04545 | 170 | Pfam | Alcohol dehydrogenase GroES-like domain | 19 | 74 | IPR013154 | - | |
Trre15g04545 | 170 | Pfam | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain | 123 | 167 | IPR006140 | GO:0051287 | |
Trre15g04545 | 170 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 52 | 66 | IPR002328 | GO:0008270|GO:0016491 | |
Trre15g04545 | 170 | SUPERFAMILY | GroES-like | 12 | 131 | IPR011032 | - | |
Trre15g04545 | 170 | Gene3D | - | 113 | 169 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre15g04545 | Trre-Chr15 | 56242261 | 56244710 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre15g04545 | 8 | 170 | Monolignol Biosynthesis Gene Families | AT4G37990 | 62.121 | 5.49e-72 | 219 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre15g04545 | - | K23232 | pvy:116143840 | 251.521 |