Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04544 ATGAAGGCTGCAATGAGTACTTTAGATGGTATCATTGATACAGTTTCAGCTGATCATTCTCTCTCACCTCTTATTGGTTTGTTAAAGTCTCATGGAAAACTTGTAATGGTTGGTGCTCCAATGAAGCCTCTTGAGGTCCATGCCTCTCATTTAATTTTGGGGAGAAAGATAGTAGCTGGAAGTAATATTGGAGGAATGAAAGAGACTCAAGATATGATTAATTTTGCTGCTAAACATGATGTAAAACCTACCATTGAAGTCATTCCTATGGATTATGTTAACATTGCAATTGAGAGACTCCTCAAAGCAGATGTCAAATATCGATTTGTGATTGACATTGGAAACACTCTCAAACCAAGCTCTCAACTCTAG 372 0.3737 MKAAMSTLDGIIDTVSADHSLSPLIGLLKSHGKLVMVGAPMKPLEVHASHLILGRKIVAGSNIGGMKETQDMINFAAKHDVKPTIEVIPMDYVNIAIERLLKADVKYRFVIDIGNTLKPSSQL 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04544 123 PANTHER ALDEHYDE REDUCTASE 1 116 IPR047109 GO:0016616
Trre15g04544 123 Gene3D - 1 83 - -
Trre15g04544 123 Gene3D - 84 113 - -
Trre15g04544 123 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 82 IPR036291 -
Trre15g04544 123 FunFam Putative cinnamyl alcohol dehydrogenase 6 2 83 - -
Trre15g04544 123 FunFam Putative cinnamyl alcohol dehydrogenase 6 84 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04544 Trre-Chr15 56241654 56242215 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04544 1 123 Monolignol Biosynthesis Gene Families AT4G37990 65.854 4.67e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04544 K23232 - tpra:123922700 222.631