Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04481 ATGATTGTGAAATTGGGCTTCCTAGTGATTTTGATGATGGCTTTGGCAGTTAAAGCCCAACTGAAAAGTGGGTTTTATTCAACTACATGTCCAACAGCTGAGTCCATCGTACGGTCCACAGTTGTATCTTACTTCAACAAAGATCCAACCATTGCTCCTGCCCTACTCAGGCTTCATTTCCATGATTGCTTTGTGCAAGGCTGCGATGGATCCATATTGATTGCAGGCTTCTCTGCAGAGAGGAATGCATTGACAAACCTTGGTCTAAGAGGTTTTGAAGTGATAGATAATGCAAAATCACAAATAGAAGCCATATGCCCTGGAGTAGTCTCATGTGCTGACATTCTAGCATTGGCAGCTCGTGATGCCGTCGATTTGAGTGATGGCCCTAGTTGGTCAGTACCCACAGGAAGAAGAGATGGAAGGACTTCATTATCATCTCAAGCCGCAAACTTACCTTCTCCACTTGAACCTGTTTCTGTCCACAAACAAAAATTTGCTGCCAAAGGTCTAAATGATCATGACCTTGTTACCTTACTTGGTGCACATACCATAGGCCAAACAGATTGCAGATTCTTTAGTTATCGTCTCTACAATTTCACAACCACCGGCAATGCTGATCCTACTATAAACCAAGCTTTCTTAGCTCAACTTCAAGTACTATGTCCAAAAAATGGTGATGGTTTGAGAAAGGTGGCTTTGGACAAAGATAGTCCAGCCAAATTTGATGTGAGTTTCTTCAAAAATGTACGCGATGGTAACGGGATTCTAGAGTCGGACCAAAGGTTGTGGGATGATTCTGCTACAAGAAGGGTGGTACAAAATTATGGTGGGAATTTTAGAGGGCTATTGGGGTTTAGATTTGATTTTGAATTTCCAAAGGCTATGATTAAGTTGAGTAGTGTAGATGTGAAGACTGGTACTGATGGAGAGATTAGAAAAGTGTGCACAAAATTTAATTGA 963 0.4154 MIVKLGFLVILMMALAVKAQLKSGFYSTTCPTAESIVRSTVVSYFNKDPTIAPALLRLHFHDCFVQGCDGSILIAGFSAERNALTNLGLRGFEVIDNAKSQIEAICPGVVSCADILALAARDAVDLSDGPSWSVPTGRRDGRTSLSSQAANLPSPLEPVSVHKQKFAAKGLNDHDLVTLLGAHTIGQTDCRFFSYRLYNFTTTGNADPTINQAFLAQLQVLCPKNGDGLRKVALDKDSPAKFDVSFFKNVRDGNGILESDQRLWDDSATRRVVQNYGGNFRGLLGFRFDFEFPKAMIKLSSVDVKTGTDGEIRKVCTKFN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04481 320 SUPERFAMILY Heme-dependent peroxidases 20 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 Gene3D Peroxidase, domain 2 153 299 - -
Trre15g04481 320 PRINTS Plant peroxidase signature 109 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Plant peroxidase signature 90 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Plant peroxidase signature 128 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 FunFam Peroxidase 24 165 - -
Trre15g04481 320 CDD secretory_peroxidase 20 319 IPR033905 GO:0004601|GO:0042744
Trre15g04481 320 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601
Trre15g04481 320 ProSiteProfiles Plant heme peroxidase family profile. 20 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Trre15g04481 320 Gene3D - 24 320 - -
Trre15g04481 320 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Haem peroxidase superfamily signature 128 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 PRINTS Haem peroxidase superfamily signature 110 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 MobiDBLite consensus disorder prediction 137 154 - -
Trre15g04481 320 MobiDBLite consensus disorder prediction 127 155 - -
Trre15g04481 320 PANTHER PEROXIDASE 25-RELATED 13 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre15g04481 320 FunFam Peroxidase 153 299 - -
Trre15g04481 320 Pfam Peroxidase 37 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04481 Trre-Chr15 55487858 55489618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04481 4 320 Peroxidase AT2G41480 70.807 6.04e-174 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04481 K00430 - gmx:100816487 536.184