Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04437 ATGTTGCGAAGGATTTGCATGAAGAAGCCTGATGTTCTTGGAAACGATGACACGAGAGCATGGTTCACAAAGCTTGAGAGGCACCATATGGGGCAATTCTCTATGGCTGCTTATCAAGCAAACTCTATCATGGAAGATTACAGTCATGTTGAAGTGGGTGACAACAGTCTTTTTGTCGGAATATACGATGGACATCGTGGCACAGACGCAGCAAAGTTCATATCAAATCACATTTTTGAGGAACTATCAAGGTTGATTCGTGAAAACAACAATGTGATGTCTGAGAAGCTTCTTCGTGAAGCCGTAGCTGCAACTGAAGAGAAGTTCACTGATGTTGGACGCTATATATAG 351 0.4245 MLRRICMKKPDVLGNDDTRAWFTKLERHHMGQFSMAAYQANSIMEDYSHVEVGDNSLFVGIYDGHRGTDAAKFISNHIFEELSRLIRENNNVMSEKLLREAVAATEEKFTDVGRYI 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04437 116 Gene3D - 12 114 IPR036457 -
Trre15g04437 116 SUPERFAMILY PP2C-like 24 112 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04437 Trre-Chr15 55133032 55133606 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04437 21 114 PP2C-type Phosphatase Gene Family AT5G06750 48.936 3.36e-26 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04437 K01102 - tcc:18593516 109.768