Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04436 ATGTTGTCAAGGATTTGCATGAAGAAGCCTGATGTTCTTGGAAACGATGACACGAGAGCATGGTTCACGAAGCTTGAGAGGCACCATATGGGGCAATTCTCTACGGCTGCTTATCAAGCAAACTCTACCATGGAAGATTACAAAGTTCACCCAAGTTGGGTGCTATATATAGCCAACCTTGGGGATTCTCGAGTTGTGCTTGGCACGACTTACACTGACCTGCCCTTTAGACAAGGGCTACAAGCCCAACAGTTAACAAGAGATCGCAATCGTGAGGATCATCATATTAGAGTAGGATTGCAACAAATATATCCAGATGATACTATTCTCATGCCCGATGATTATGGATGGAGGGCTAAAGACTTATCCAAGATTACAAGTACTATTGGGGATGTCTACCTAAAAACTTATTTGCCAATCGTTAGAGACGTGTCTTTACCACCTTATCGATATGCTGTAACATCAAAACCAAGGATAAATTCAAGAATATTAAGAGATGGTGATGAATTCTGTATTCTTGCATCTCGTGGATTTTGGGAAGTCATGACAAATAACGAGGCCGTTTCAATTGTTAAGAGAAATTCCCGACGTGGCATTGCAAAAATACTTTTAAGGAAGGCATTGGAAAAGGTGGCAGTAAAAGAGAAAATAAGTTATAAAGACATTGTACGTTCTGCTGATAGAAAGAAATTTCATGATGATATCACAATAATAGTAGTTTTTTTAGATTTATGCAGGCCTCTATGGAAGAGAAATGTACCAAAACTCTCATACAAAACCCCCTCCCATACATAG 795 0.395 MLSRICMKKPDVLGNDDTRAWFTKLERHHMGQFSTAAYQANSTMEDYKVHPSWVLYIANLGDSRVVLGTTYTDLPFRQGLQAQQLTRDRNREDHHIRVGLQQIYPDDTILMPDDYGWRAKDLSKITSTIGDVYLKTYLPIVRDVSLPPYRYAVTSKPRINSRILRDGDEFCILASRGFWEVMTNNEAVSIVKRNSRRGIAKILLRKALEKVAVKEKISYKDIVRSADRKKFHDDITIIVVFLDLCRPLWKRNVPKLSYKTPSHT 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04436 264 CDD PP2Cc 55 242 IPR001932 -
Trre15g04436 264 ProSiteProfiles PPM-type phosphatase domain profile. 1 242 IPR001932 -
Trre15g04436 264 SUPERFAMILY PP2C-like 52 243 IPR036457 -
Trre15g04436 264 Gene3D - 15 244 IPR036457 -
Trre15g04436 264 PANTHER PROTEIN PHOSPHATASE 54 240 IPR015655 GO:0004722|GO:0006470
Trre15g04436 264 SMART PP2C_4 12 240 IPR001932 -
Trre15g04436 264 Pfam Protein phosphatase 2C 129 210 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04436 Trre-Chr15 55123884 55125352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04436 55 264 PP2C-type Phosphatase Gene Family AT5G06750 38.462 3.27e-40 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04436 K01102 - atri:130825958 145.206