Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04435 ATGGGGCAATTCTCTATGGCTGCTTATCAAGCAAACTCTATCATGGAAAATTACAGTCAAGTTGAAGTGGGTGACAACAGCCTTTCTGTCGGAATATACGACGGACATGACGGCACAAACGCAGCAAAGTTCATCTCACATCACATTCTTGAGGAACTATCATGGCTAATTCGTGAAAACAACAATGTGATGTCTGTGAAGCTTCTTCGTGAAGCCGTAGCTGCAACTGAAGAGAAGTTCACTATGGCTCTGTTTGGGACGCTATATACAGCAAGCCTTGGCAATTCTCGAGCTGTGCTTGGCAAGTACACCTTTCCGTTGGACAAATATCAGGTAGAAGCCCAACCGATAACAAGAGATCACAATTGTGAGGATGTTTATAATAATAGAGGATCATTGATAGTAAAACTTCCAGATGATCCTACTATTCTCTGGAAGGATGAATATGGATGGAAGGTTAGAGGCTTATGCAAGGCCGGCATTGCAAAAATACTTTTAAGGAAGGCATTTGAAAAGGTAGCAGCAAAAGAGAAAATAAGTTATAAAGACATTGTATGTTCTGCTGATAGAAAGAAATTTCATGATGATATCACAATAATAGTAGTTTATTTAGATTTAGATAAGAATGAAAAGCCTCTATGGAAGAAAAATGTACCAAAACTCTCATACAAAGCCCCCTCCCATACATAG 690 0.3928 MGQFSMAAYQANSIMENYSQVEVGDNSLSVGIYDGHDGTNAAKFISHHILEELSWLIRENNNVMSVKLLREAVAATEEKFTMALFGTLYTASLGNSRAVLGKYTFPLDKYQVEAQPITRDHNCEDVYNNRGSLIVKLPDDPTILWKDEYGWKVRGLCKAGIAKILLRKAFEKVAAKEKISYKDIVCSADRKKFHDDITIIVVYLDLDKNEKPLWKKNVPKLSYKAPSHT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04435 229 SMART PP2C_4 1 202 IPR001932 -
Trre15g04435 229 PANTHER PROTEIN PHOSPHATASE 2 131 IPR015655 GO:0004722|GO:0006470
Trre15g04435 229 SUPERFAMILY PP2C-like 9 205 IPR036457 -
Trre15g04435 229 ProSiteProfiles PPM-type phosphatase domain profile. 3 204 IPR001932 -
Trre15g04435 229 Gene3D - 1 130 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04435 Trre-Chr15 55117326 55119932 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04435 158 229 PP2C-type Phosphatase Gene Family AT5G06750 41.333 7.86e-09 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04435 K01102 - han:110897602 109.383