Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04419 ATGGAGCTAGAACTCTTGTCTTGGCTTAAACTTTTTTCTTTCTCTTTCATTTTTCTTCTCTTTGTTCTCAAAGTCACTGTCTTACTTTGGTGGAGACCAAGAAAAATTGAAGACTATTTCTCTAAACAAGGAATTAGAGGACCCCCTTATCGTTTCTTCATTGGAAATGTTAAAGAACTTGTTAGTATGATGTTGAAAGCTTCCTCTCAACCCATGCCTAATTTCTCTCATAACATTCTTCCTAGAGTCCTTTCTTTCTACCATCATTGGAAGAAAATTTATGGTGGAACATTCCTAGTTTGGTTTGGACCCACGGTTCGTCTTACAGTGTCTGATCCAGACCTTATAAGGGAAATCTTCACATCCAAGTCAGAATTTTATGAGAAAAATGAAGCCCCCCCACTTGTGAAGCAGCTAGAAGGTGATGGGCTCCTTAGCCTTAAAGGTGAAAAATGGGCTCACCACCGTAGAATTATCTCTCCCACTTTTCACATGGAAAATCTCAAATTGCTGATACCGGTGATGGCAACAAGCGTGGTTGAGATGTTGGAAAAGTGGTCAGCAATGAGTGACAAAGGTGAGGTGGAAATCGAAGTTTCTGAGTGCTTTCAAACCCTAACCGAAGATGTTATTACTAAGACCGCGTTTGGAAGCAGCTATCAAGATGGAAAAGCCATTTTCCACTTACAAACTCAACAAATGGTCTTAGCTGCTGATGCCTTTCAAAAAGTTTTCATTCCCGGTTACAGATTCTTTCCCACAAAGAAGAATATAAAATCTTGGAAACTGGACAAACAAATAAAGAAATCATTGGTGAAGCTAATAGAAAGAAGAAAAGAGAATGAGAATGAGAGATTATTATTATTAATTGATGAAAAAAGTCCAAAAGATTTACTAGGACTAATGATACAAGCAGCATCAAACAACAACAATAATGTGACAGTGGATGACATTGTGGAAGAGTGCAAGAGCTTTTTCTTTGCAGGCAAACAAACCACATCAAACTTGCTGACGTGGACGACCATTCTATTAGCAATGCACCCACATTGGCAGGTTAAGGCACGTGATGAGGTTATCAAGATGTGTGGGTCACGTGACCTTCCCACTAAAGATCATGTTGTAAAGCTTAAGACGCTAAACATGATAGTTAACGAGTCACTAAGACTGTACCCACCAACAATCGCAACAATCCGACGGGCAAAAACAGACGTGGAATTAGGAAGCTATAAAATACCACGCGGAACAGAGCTTTTAATTCCAATCCTAGCCGTTCATCACGATCAAGCTATATGGGGTAACGATGTAAACGAATTCAATCCTGGCCGTTTCTCTGAAGGTGTAGCACGCGCTGCGAAACATCCAGTGGCATTCATACCTTTTGGCCTCGGTGTACGCACATGTATAGGACAAAACCTCGCAGTGCTACAAACAAAACTGGCCCTTGCAATCATACTGCAGCGTTTTAGTTTCAGGTTGGCCCCTAGTTATCAACATGCACCAACGGTCCTGATGCTACTTTATCCTCAGTATGGTGCACCAATCATATTCAACCAATTGTCCACGTTGGATAATCCACATCAAGAGTCCTCCACATAG 1596 0.4085 MELELLSWLKLFSFSFIFLLFVLKVTVLLWWRPRKIEDYFSKQGIRGPPYRFFIGNVKELVSMMLKASSQPMPNFSHNILPRVLSFYHHWKKIYGGTFLVWFGPTVRLTVSDPDLIREIFTSKSEFYEKNEAPPLVKQLEGDGLLSLKGEKWAHHRRIISPTFHMENLKLLIPVMATSVVEMLEKWSAMSDKGEVEIEVSECFQTLTEDVITKTAFGSSYQDGKAIFHLQTQQMVLAADAFQKVFIPGYRFFPTKKNIKSWKLDKQIKKSLVKLIERRKENENERLLLLIDEKSPKDLLGLMIQAASNNNNNVTVDDIVEECKSFFFAGKQTTSNLLTWTTILLAMHPHWQVKARDEVIKMCGSRDLPTKDHVVKLKTLNMIVNESLRLYPPTIATIRRAKTDVELGSYKIPRGTELLIPILAVHHDQAIWGNDVNEFNPGRFSEGVARAAKHPVAFIPFGLGVRTCIGQNLAVLQTKLALAIILQRFSFRLAPSYQHAPTVLMLLYPQYGAPIIFNQLSTLDNPHQESST 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04419 531 CDD CYP734 84 513 - -
Trre15g04419 531 Coils Coil 272 292 - -
Trre15g04419 531 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 SUPERFAMILY Cytochrome P450 39 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 Pfam Cytochrome P450 84 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 Gene3D Cytochrome P450 29 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04419 531 FunFam Cytochrome P450 734A1 30 520 - -
Trre15g04419 531 PANTHER CYTOCHROME P450 FAMILY MEMBER 23 512 - -
Trre15g04419 531 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04419 Trre-Chr15 54914684 54919385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04419 1 524 Cytochrome P450 AT2G26710 75.901 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04419 K15639 - gmx:100780027 878.241