Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04365 ATGGCTTCTATCTTCAAAGCTGCCTCACACCCACTTTTCCTTATCTTGATTCTTTTCTCTGCCTCCCAATTTTTGGTCATCAATTGTACTAATTGTACTGAATTTGAAGTTGGAGGTAGAATTGGTTGGGTTGTCCCTAACTCAAAGGACAAAGATGAAATGTATAACCAATGGGCTTCCCAAAATAGATTCAAAATTGATGACACCATTCGTTTCAAGTACGAGAAAGACTCGGTGATGGTGGTGAGTGAAGAAGAATATGAAAGATGCAAATCCGCACGTCCACTCTTTTTCGGCAACAATGGTGACACAGTTTTCAAATTTGAGCGACCGGGATTGTTCTACTTCATTAGTGGTGTTAGTGGCCATTGTACAAGAGGACAGAAAATGATCATCAAGGTTTTGGACATTGAACCAGAACAAGAACCAACAGCACCTTCACCACAATCTTCAAATGAGAATGCACCAACAGGACAATCTAAAGCTGCTCAAATAACTCTTATAACTATCACAATATCCACACTTTTTGCTTTGTCATTCTTAGGCATGATTTATGTTTGA 561 0.3904 MASIFKAASHPLFLILILFSASQFLVINCTNCTEFEVGGRIGWVVPNSKDKDEMYNQWASQNRFKIDDTIRFKYEKDSVMVVSEEEYERCKSARPLFFGNNGDTVFKFERPGLFYFISGVSGHCTRGQKMIIKVLDIEPEQEPTAPSPQSSNENAPTGQSKAAQITLITITISTLFALSFLGMIYV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04365 186 Gene3D - 32 138 IPR008972 -
Trre15g04365 186 FunFam Early nodulin-like protein 1 32 139 - -
Trre15g04365 186 CDD OsENODL1_like 33 135 IPR041846 -
Trre15g04365 186 Pfam Plastocyanin-like domain 52 128 IPR003245 GO:0009055
Trre15g04365 186 ProSiteProfiles Phytocyanin domain profile. 33 136 IPR003245 GO:0009055
Trre15g04365 186 SUPERFAMILY Cupredoxins 32 135 IPR008972 -
Trre15g04365 186 PANTHER BLUE COPPER PROTEIN 33 151 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04365 Trre-Chr15 54250637 54251895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04365 14 135 Phytocyanin Superfamily AT3G18590 61.475 4.21e-56 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04365 - - gmx:102667643 224.557