Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre15g04359 | ATGGCTGGTGGAGGAAGAAGGAGGCATCATCATTTTAGTAAGATTCATGCATTTTCATGTGGTAAAGCATCAATGAAACAAGATGAACAATCACTTATAGGAGGACCTGGTTTTTCAAGAAAAGTTTATTGCAATGATTCAGAACGTGCTATGTCTAGTCTTTATAATTATGGTGATAATTATGTTAGAACTACTAAGTATACAGTTGCTACTTTTCTACCTAAATCTTTGTTTGAACAATTTAGAAGAGTTGCCAATTTTTACTTCTTAGTTGTTGCTATTTTGTCTTTCTTCCCTGTTGCTCCTTATTCTGCTGTTAGCAATGTTATTCCTCTTCTTGTTGTTGTTTCTGCTACTATGGCCAAAGAGTTCATTGAAGATTTTCAGAGAAAAAAACAGGATATAGAAATGAATAACAGAAAAGTGAAAGTACATAGTGGAGGTGGTGTTTTTGATTATTCTAAATGGAGAGATTTAAAAGTTGGAGACATAGTGAAAGTGGAAAAAGATGAGTATTTTCCTGCTGATCTCATATTACTTGCATCAAACTATGACGATGCAATTTGCTATGTCGATACAATGAATCTCGACGGAGAAACAAATCTTAAACTAAAACAAGCACTAGAAGGGACATCAAAATTTCAAGAAGACTCAAACTTTCAGAATTTCAAGGCTGTGATAAGATGCGAAGATCCAAACGCAAATTTGTATGCGTTTGTAGGAAGTTTAGAGATTGAAGAAGATCAACAATATCCACTTGCACCTCAGCAGCTACTTCTTAGAGACTCTAAGTTGAAGAACACAGATTTTATCTATGGTGTCGTGATCTTTACCGGTCACGATACAAAAGTTATGCAGAATTCAACAGATCCTCCTTCCAAGAGAAGCAAGATTGAGAAAAGAATGGACAAAGTTATATACTGTTTGTTCTTTGTATTGATTTTGGTTTCATTTATCGGTTCGATTTTCTTCGGTATTTGGACAAAGAAAGATACTAAAAATGGAAGAATGAAGAGATGGTACCTTAATCCTGATGATACTACAGTTTACTATGATCCTCATAAAGCAGTACTTGCAGCAATTTATCATTTCCTTACAGCATTGATGTTGTATGGTTACTTTATTCCGATTTCGTTGTATGTTTCCATTGAAGTTGTGAAAGTTCTTCAAAGCATTTTCATCAACAACGATTTGAACATGTATCACGAGGAAACCGATAAGCCAGCGCATGCTCGCACGTCAAATTTGAATGAAGAACTTGGTCAAGTTGATACCATACTTTCGGATAAAACCGGAACATTGACCTGCAATTCTATGGAATTTATCAAGTGTTCTATCGGTGGAGTTGCTTACGGAAGAGGATTTACCGAAGTTGAGAGAGCTTTATCGAAGAGAAAAGATTCATATTTCGGTCGAAAGTTGAAAAATGACAAAAATGTTGCAAAGGCTACTGAATCAAAATCAACCATTAAAGGATTTAACTTTTCGGATGAAAGGATCATGAATGGAAATTGGGTGAGACAACCTAATGCCAATGTGATACAAAGCTTTCTAAGGGTATTGGCTGTATGCCATACTGCAATACCTGAAGTCGATGAAGCAACCGGTAAAATTTCATACGAAGCTGAATCGCCTGACGAGGCTGCTTTTGTTGTTGCCGCAAGAGAATTCGGATTTGAATTTTATGAAAGGACACATGCAGCTATTTCACTTCATGAATTAGACCTCAATTCAAACATGAAATCAGAAAGGTCCTACAATATTTTAAATGTATTAGAGTTTAGTAGTGCAAGAAAGCGAATGTCCGTAATCGTAAGAGACCACAAAGGAAAACTACTGCTACTTAGCAAAGGCGCCGACAGTGTCATGTTTGAATTACTTGGAAAGAATGGAAGGGAATTTGAAGAGCAGACTAAGTACCACATTAATGAATACGCCGATTCTGGTTTGAGGACGTTGATACTTGCTTACCGTGAACTTGACGAGGAAGAGTACAAGCAGTTTAATAGAGAGTTGACAGAGGCTAAAAACTTAGTGAGTGCAGATCAGGAGCAGATTGTAGAAGACATCTTGCAAAAGATTGAGAAGGATTTGATTCTTCTTGGTGCTACCGCAGTTGAAGATAAATTACAAGACGGTGTTCCTGAATGCATCGACAAACTAGCACAGGCTGGGATTAAGTTATGGGTATTGACTGGTGATAAAATGGAGACAGCGATTAATATCGGATTTGCTTGTAGTTTGCTTCGACAAGGAATGAAACAAATTATAATTAATTCAGATACTCCTGAAAACAAATCGCTCGAGAAAATGGAGGACAAATCTGCTGCTGAAGCGGCAATTAAGGCAAGTGTTGTTCGTCAAATAACGGAGGCAAAGACGTTACTTTCTAGATCGGACGACAATTCTGAGGCATTAGCTTTGATCATTGATGGAAAATCTCTTGCTTATGCGCTAGAAGACGATGTAAAGAACTTGTTTCTTGAACTTGCAATTGGTTGCGCATCTGTTATATGCTGTCGTTCGTCTCCAAAGCAAAAAGCACTTGTTACTAGATTGGTTAAGATGAGACCTGGTAGTACTACTCTAGCTATTGGAGATGGTGCAAATGATGTTGGTATGCTCCAAGAAGCAGATATTGGAATCGGTATCAGTGGTGTAGAAGGAATGCAGGCAGTTATGTCAAGTGATATCGCCATTGCTCAATTTCGTTATCTCGAACGCTTACTTCTTGTGCATGGACATTGGTGTTACAGAAGAATCTCATCTATGATATGTTACTTCTTTTACAAGAATATCACATTCGGCTTCACTTTGTTCTTCTATGAGATGTATACCTCATTCTCCGGCCAAGCTGCATACAACGATTGGTTCATGTCATTTTATAATGTATTCTTCACTTCACTTCCTGTAATTGCTTTAGGAGTTTTCGACCAAGATGTCTCATCCAAATTATGTCTCAAGTTTCCATTACTATACCAAGAAGGTGTACAAAACTTACTATTCAGCTGGAAAAGAATAATCGGTTGGGCATTAAACGGAGTTGCAAGTTCGACCATCATATTCTTCTTCTGCATTCGCGCGCTTGAGCATCAATCGTTTCGCAAAGGTGGTGAAGTTGTTGACTTAGAAATTCTCGGCGCAACAGTGTACACATGTGTTGTGTGGGTGGTGAATTGCCAAATGGCGTTATCGATCACATACTTTACATACATACAACATATATTCATATGGGGAAGCATCGGAATATGGTACATTTTCCTCTTGGCATATGGAGCTATAGATTCTTCTCTATCAACAACTGCTTATAAGGTTTTCATCGAAGCATGTGCGCCATCACTATCTTATTGGATTGTTACTTTGCTCGTTCTTATTGCCGCATTGCTTCCATATTTCTTGTTCTCTACTATTCAACTGCGGTTCTTCCCGGTGTATCATCAAATGATACAGTGGATAAGAAAGGATGGACAAACTAATGATCCGGAATTTTGTGATATGGTGCGACAGAGATCAATTCGACATACAACGGTTGGATTCACTGCTCGTTTGGAAGCTTCTAGACGTTTTGAAGCGTCTAGACGTTCAGAAATATCTTTAGTACCTATTGACGGGAAGTCTGCAGTGAACCAATAA | 3633 | 0.3785 | MAGGGRRRHHHFSKIHAFSCGKASMKQDEQSLIGGPGFSRKVYCNDSERAMSSLYNYGDNYVRTTKYTVATFLPKSLFEQFRRVANFYFLVVAILSFFPVAPYSAVSNVIPLLVVVSATMAKEFIEDFQRKKQDIEMNNRKVKVHSGGGVFDYSKWRDLKVGDIVKVEKDEYFPADLILLASNYDDAICYVDTMNLDGETNLKLKQALEGTSKFQEDSNFQNFKAVIRCEDPNANLYAFVGSLEIEEDQQYPLAPQQLLLRDSKLKNTDFIYGVVIFTGHDTKVMQNSTDPPSKRSKIEKRMDKVIYCLFFVLILVSFIGSIFFGIWTKKDTKNGRMKRWYLNPDDTTVYYDPHKAVLAAIYHFLTALMLYGYFIPISLYVSIEVVKVLQSIFINNDLNMYHEETDKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIGGVAYGRGFTEVERALSKRKDSYFGRKLKNDKNVAKATESKSTIKGFNFSDERIMNGNWVRQPNANVIQSFLRVLAVCHTAIPEVDEATGKISYEAESPDEAAFVVAAREFGFEFYERTHAAISLHELDLNSNMKSERSYNILNVLEFSSARKRMSVIVRDHKGKLLLLSKGADSVMFELLGKNGREFEEQTKYHINEYADSGLRTLILAYRELDEEEYKQFNRELTEAKNLVSADQEQIVEDILQKIEKDLILLGATAVEDKLQDGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIINSDTPENKSLEKMEDKSAAEAAIKASVVRQITEAKTLLSRSDDNSEALALIIDGKSLAYALEDDVKNLFLELAIGCASVICCRSSPKQKALVTRLVKMRPGSTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFFYEMYTSFSGQAAYNDWFMSFYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGVQNLLFSWKRIIGWALNGVASSTIIFFFCIRALEHQSFRKGGEVVDLEILGATVYTCVVWVVNCQMALSITYFTYIQHIFIWGSIGIWYIFLLAYGAIDSSLSTTAYKVFIEACAPSLSYWIVTLLVLIAALLPYFLFSTIQLRFFPVYHQMIQWIRKDGQTNDPEFCDMVRQRSIRHTTVGFTARLEASRRFEASRRSEISLVPIDGKSAVNQ | 1210 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre15g04359 | 1210 | SUPERFAMILY | HAD-like | 422 | 920 | IPR036412 | - | |
| Trre15g04359 | 1210 | Pfam | Phospholipid-translocating P-type ATPase C-terminal | 893 | 1143 | IPR032630 | - | |
| Trre15g04359 | 1210 | FunFam | Phospholipid-transporting ATPase | 701 | 905 | - | - | |
| Trre15g04359 | 1210 | Gene3D | - | 540 | 675 | IPR023299 | GO:0000166 | |
| Trre15g04359 | 1210 | FunFam | Phospholipid-transporting ATPase | 543 | 701 | - | - | |
| Trre15g04359 | 1210 | SFLD | p-type atpase | 409 | 916 | IPR044492 | - | |
| Trre15g04359 | 1210 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 429 | 435 | IPR018303 | - | |
| Trre15g04359 | 1210 | Pfam | E1-E2 ATPase | 137 | 381 | - | - | |
| Trre15g04359 | 1210 | Gene3D | - | 109 | 290 | - | - | |
| Trre15g04359 | 1210 | PANTHER | PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE | 31 | 1156 | - | - |
Showing 1 to 10 of 25 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre15g04359 | K01530 | - | gmx:100799312 | 2023.82 |
Showing 1 to 1 of 1 entries