Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04355 ATGGCAATGGAGATTACTGCTATGGCTTCACTACCAACAACAACAACAACAACAACAACAACAAGAACTTCACTTCCAACTCCTTCTTCCACTTCACCTCACACAATCACCACCTTCTCAAAACCTCTATTTAGACGTATATCATTACCAACTTCAACCACCATTTCACTACTTTCTCTCTTCACCATTCCAAATGAAGCCAAAGCTGCTGTTAACATCTCCAAAGACCAAATTGTTTCTTCTCTCACCCAAGTGGAGCAAACAATTGATCAGGTTCAAGAGGTAGGTTCTGGTTTTTTAGACTCAGCACAACGTGTTGCTGAAGCTATTGGGAGTGTTTTGAAGCCTGGAATCGATGCCGGGTTGCCAATTGTGCAACAGGCTGGGGAAGAAGCTTTGAAATTTGCTTCACCAGCTTTTTCTGAGGCTTCTAAGAAGGCTCAAGAAGCACTTCAAAGCTCTGGTCTTGATACTCAACCTGTTCTTACTGCTGCTAAGACAGTGGCAGATGCTGCACAACAAACGACCCAGGCGATTGAAGGTGCCAAGCCAATAGCCTCGTCAACCATCGAAACCATATCTACATCAGATCCTACTGTGATTGCTGGAACAGCTGGTGCACTATTTGTTGCATATCTCTTGTTTCCTCCAATCTGGTCTGCCATTTCCTTCAATTTTCGCGGTTACAAAGGAGACCTGACACCAGCTCAAACACTTGATATGTTATGCACACAAAACTACGTTTTGATTGATGTTAGGTCAGAGAAGGATAAGGACAAGTCTGGTATCCCTCGCCTTCCGTCTAGCGCTAAAAACAAGATGGTTGCTATTCCATTGGAAGAAGTGCCAAGCAAGATAAGAGGACTAGTGAGGAATGTGAAGAGAGTGGAAGCTGAAATAGCAGCATTAAAGATTTCATATCTGAAGAAAATCAACAAAGGCTCAAACATTGTTATATTGGACTCGTACTCGGACTCGGCAAAGATAGTTGCAAGAACGCTAACCGGGCTTGGATTTAAGAACACGTGGATAGTTGGTGATGGATTTTCCGGAGGCAAAGGGTGGTTACAAAGTAGATTAGGAACGGATTCGTATAAATTTTCATTTGCAGAGATCTTGTCTCCATCAAGAATCATCCCTGCAGGTGGTACTAGAAGTTTTGGAACAACCAGAGGGCAATCAAGTCAGAAACTTCTTCCTGACTGA 1206 0.4312 MAMEITAMASLPTTTTTTTTTRTSLPTPSSTSPHTITTFSKPLFRRISLPTSTTISLLSLFTIPNEAKAAVNISKDQIVSSLTQVEQTIDQVQEVGSGFLDSAQRVAEAIGSVLKPGIDAGLPIVQQAGEEALKFASPAFSEASKKAQEALQSSGLDTQPVLTAAKTVADAAQQTTQAIEGAKPIASSTIETISTSDPTVIAGTAGALFVAYLLFPPIWSAISFNFRGYKGDLTPAQTLDMLCTQNYVLIDVRSEKDKDKSGIPRLPSSAKNKMVAIPLEEVPSKIRGLVRNVKRVEAEIAALKISYLKKINKGSNIVILDSYSDSAKIVARTLTGLGFKNTWIVGDGFSGGKGWLQSRLGTDSYKFSFAEILSPSRIIPAGGTRSFGTTRGQSSQKLLPD 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04355 401 Gene3D - 230 369 IPR036873 -
Trre15g04355 401 Coils Coil 286 306 - -
Trre15g04355 401 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 209 351 IPR036873 -
Trre15g04355 401 PANTHER RHODANESE/CELL CYCLE CONTROL PHOSPHATASE SUPERFAMILY PROTEIN 37 364 IPR044690 GO:0009704|GO:0071277|GO:0090333
Trre15g04355 401 MobiDBLite consensus disorder prediction 1 34 - -
Trre15g04355 401 CDD RHOD 237 351 - -
Trre15g04355 401 MobiDBLite consensus disorder prediction 8 34 - -
Trre15g04355 401 ProSiteProfiles Rhodanese domain profile. 243 364 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04355 Trre-Chr15 54112295 54115501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04355 8 322 Sulfurtransferasese or Rhodanese AT5G23060 66.139 3.20e-152 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04355 - - gmx:100813363 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04355 15 54112295 54115501 Trre15g04355 15 54112295 54115501 ECH