Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04305 ATGCCACGTCACATGATTTTCATTCTCTCTCACGAGAAAAAACTAACTAAGGGATTGATTGAATTGATGATGATAGAAAATTCTTCTTCAATTAATGAACAAGAAGATGAAAATGGAAGAATGAAATATTCCAACAAAGCAATAGGTACATCAAGACAATGGACATCATTAAGAAATCCAAGAATTGTTAGAGTGTCACGTTCTTTAGGAGGAAAAGATAGACATAGCAAAGTATGCACAATTAGAGGATTAAGAGACCGTCGTATTAGGTTATCTGTACCAACAGCAATTCAGTTATATGATCTTCAAGATAGACTTGGTTTAAGTCAACCTAGTAAAGTTGTTGATTGGTTAATTGAAGCAACACAATCTGATATTGATAAATTACCACCACTTCAAAATATTATTCCTCAATGTTTTACTACTACTCAACAACAACAACAAACCCTATTGCATCATCAACAACAAAGTGCTTTTTATGATCATCTTCAAATCAAAGGTAAAGAAGCTGAAATTACTTCACAAAATTATAATTACCCTTCAAGTGTTTTTCCATATAACTTGGATTATCCTTCAAGTACTTTGACTTTATCTCAATTTGGAAGCAATATTAATCATGGTAATTCATCACAATTACTTTTTTGTCCTTCTTCTAATTCTGCTATGCCAGCATCAGTTTTTAGTAGTAGTAGTAGTAGTAGTGCTAATTTGCAGCAACATGCTCCATCAATGGAAATTAGTAGTGATGTTCAAAGACAATTCACAAATGTTCAGATCTTGAATTCATCATCAACAAGTTCTTTCATTCCATCTCTTCAACTTCCAATCAATTCGCCTTTTAGACGTCTTCCAATGCCGTTTATAAATTCCAAGGTTCTTGATTCAGATCACAATAACTCCAGAAATTAA 909 0.3245 MPRHMIFILSHEKKLTKGLIELMMIENSSSINEQEDENGRMKYSNKAIGTSRQWTSLRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLIEATQSDIDKLPPLQNIIPQCFTTTQQQQQTLLHHQQQSAFYDHLQIKGKEAEITSQNYNYPSSVFPYNLDYPSSTLTLSQFGSNINHGNSSQLLFCPSSNSAMPASVFSSSSSSSANLQQHAPSMEISSDVQRQFTNVQILNSSSTSSFIPSLQLPINSPFRRLPMPFINSKVLDSDHNNSRN 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04305 302 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 51 262 IPR005333 GO:0003700
Trre15g04305 302 Pfam TCP family transcription factor 71 169 IPR017887 -
Trre15g04305 302 ProSiteProfiles TCP domain profile. 71 129 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04305 Trre-Chr15 53590796 53592577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04305 54 140 TCP Transcription Factor Family AT5G60970 81.818 4.51e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trre15g04305 TCP 8.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04305 - - psat:127073713 311.997