Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04251 ATGGCGCTGTTCAGAAGATTCTTCTACCGGAAACCACCGGATCGCCTTTTGGAGATCTCCGAGAGAGTTTATGTTTTTGACTGCTGCTTCTCCACGGACGTCTTGGAAGAAGATGAATACAGAGTTTATATGGGGGGAGTTGTGGCTCAGCTACAGGATCACTTTCCGGAAGCTTCTTTCATGGTGTTCAACTTCAGAGAAGGGGAGAGACGCACCCAAGTCTCCGACATACTTTCTCAGTATGACATGACAGTTATGGAGTATCCTCGGCAATATGAAGGTTGTCCCCTTCTGCCTCTAGAGATGATCCATCACTTTCTTCGATCAAGTGAAAGCTGGCTGTCTTTGGAGGGGCAGCAGAATGTGCTTTTGATGCACTGCGAAAGAGGAGGTTGGCCTGTTCTGGCATTCATGCTGGCAGGTCTTTTGTTATACCGGAAACAGTACACTGGAGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCCAGAGAACTACTCCACCTTTTAACTCCTTTGAACCCACAGCCTTCTCAGTTCAGATATCTTCAGTACATTTCAAGGAGACATCTGGGTTCTGAGTGGCCACCATCAGAAACACCCTTGTATCTGGATTGTCTGATTCTTAGAGACCTTCCAGTATTTGATGATGGAAAAGGTTTCAGGCCTGTTGTGCGTGTGTATGGCCCAGACCCTTCAAAACCTGCCAATAGAAGTTCAAAGCTTCTTTTTTCAACCTCAAACTCTAAAAAGCATGCTCGACACTATCAACAGGCAGAGTGTATGCTTGTGAAGATTGATATACATTTTCGTGTTCAAGGAGATGTAGTTCTCGAGTGCATAAATTTAAATGAAGATTTTACTGGTGAGGAGACAATGTTTAGAATTATGTTCCATACTGCATTTGTGCGGTCAAATATATTGATGTTGAACCGTGATGAAATTGATATTTTGTGGAATGCAAAGGATCAATATCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATGTGAACACAGTCATGGTGTGTGAAGATGCAAATGAGACAGAAAGTGCTGATATAGAAAATGCTTCACCTGAGGAATTCTATGAAGTGGAAGAGATTTTCAGCAATGCAATTGATGCACAGGAAAGTAAGGCAAATGATGATTCTCATACCTTACATGACAATGCAGTTGGTGGTGAAAATCGTAAAGGGATCTTGAGGGAGGATTCGGATCCTCATGCTTTTCAGGATTGCACGCCAGATTATGGGATTCTCAAACAGGTTGGAAAGATGGATTCCGGTATTAATGCTGTGAAAGATATATCTGTTGACGATGTTAACTACAAGTTCAATGAGAGCATGGATTCAGATCCTCAAGCAGTGAAGGACATTGCCATGGATGATGGAGAAATTAAGTCAACTTCCACTGCCATCACTTATGATATGACGATACCTCTGGAAATAAAGGAAATCCCTGAGGACGCTGATCGGGGATCAGACATTATGCAGAACAAATTTGATGAAGATAACGAAGCAACAGAAAAGGAATTAGATTACAGGGAAGGGCAACCTATGACTGATAGCTCCAAACAAAAATCTGGTAAACTAATTCCATCTACTGCTAAGAAACAATTTCCATCAAACTCAAAGCCAGGAGATACTGTTGGAAAACAAAAGATTAAAGAAACCGCTGCTTTTCAGGCAAAACAAGCTAAACCAACTGCAGTGACGAGGTGGATTCCTTCTAACAAGGGTTCTTACACAAATTCGATGCATGTATATTATCCACCATCAAGGATTAATAGTGCACCACCTGGACTGTCAAATTTAACCACTTCAAAGGAGAAAATGGAAGATAACAAAGCAAGATCTTCATCTGCTTCTTTTGGTTCTGTGGCAGTTGTTTCCGCTGACATGAAAAATGACCTGAAAAGTCGGAAGCTGGCCACTTCAAAATCGCTTGGCCACACAGTATCAGAAATTGATGCAAAATGTCCACCATCGCCACCATCAAAAGAGACATCTCTTAAGTCAGCTACTCAGGCAGAAGAACAGAGCTCAGAGCAATTGCTACAGCCTCCTCCACGGCCTTCTCCTCCCCCTCCTCCACCCCCACCTCCGCCACCACCCTTAACATCATTTAGTAGACAAGACATTAGGGTGAATTTACAGCCTGCAACTTCTCTGTCACTTCCACCTCCGCCACCACCTCCACCCTCCTGGAAGTTTGTGGCTTCATCAATAGTTGGAGAGACTTATGGTTCTTTACCACTCTCGCCACCTACTCTTCCCTTTGCAAGCAGTGAAATTACATCTAAATTTTCTGAAGTATCAACTGCAGCGGCCCCGTCAAGGCCTCCCCCTCCTCCACCACCACCGCCACCAATCCCCCATCCAAGGTATGAAGTATCAACCATTCCTCCTCCTCCACCACCACCACCAACAGTACCTCCTACAAAGCATGGAATTTCATCAATACCTCTTCCTCCTCCTCCTCCCCCCTCATTTCCAATGTCTTCATTAAACATGTCCCCATTCTCGCCACCTCCAATTGCATCCCATAAAGCTCCACCTCCGCCACCCCCACCTCCGCCACCTTTTGCTAATTCATATATAGGTTCACCTACACCACCTTTACCTCCACCACCTCCACCTCCTTTTACTAATGCTTCACCAGCAACACCTCCTCCACCTCCCTTTACTAATGCTCCCCCAACAATGCCTCCTCCACCACCACCACCACCACCACCACCTCCTTTTACTAGTGCCCCACCAGTACCGCCCCCACCTCCTCCACCCCCTTTTAGTGCATCTCAATCTACATTTACTCCTTTTAGTAGAGCTCCCCCACCCCCACCTCTTCCTCCATCAGGTGGATCCCCACCCCCACCTCCACCTCCTCCTCCTCCAATGTCTAGAGCCCCTCCGCCTCCACCTCCTCCTCCTCCAATGTCCGGAGCCCCTCCACCTCCTCCTCCTCCTCCAATGTCTAGAGCCCCTCCGCCTCCACCTCCTCCAATGTATGGAGCCCCTCCACCTCCTCCTCCTCCAATGTCCAGAGCTCCTCCTCCTCCTCCTCCTCCAATGTCTAGAGCCCCTCCGCCTCCACCACCTCCGATGTCTAGAGCCCCTCCACCACCTCCTCCGATGCACGGAGCACCACCACCACCACCACCTCCTGGTGGTCGAGGCCCTCCTCCTCCCCCACCACCTAGTGGTCGTGGCCCGCCTCCACCCCCTCCTCCTGGTGGTCGAGGCCCACCTCCTCCACCTCTTCGTGGTGGTGCACCTCCACCACCACCACCCTTAGGTTCCAAAGGTGCAAGTGTTGGACCTGCACGCCCTGGTCCAGTGGCACCAGGTCGTGGTGGATACGCACGCCCTAGTGCAGTGGCACCCCGACGATCCTCCTTAAAGCCTTTGCATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACTGCAAATTGCACCCGAGTTTGATGTTTCAGAGCTAGAAAAACTTTTCTCTGCTAATGTTCCAAAACCTACTGATTCAAGTGGCAAATCTGGAGGGAGGCGCAAGTCTACTGGATCTAAACCTGACAAAGTTCACTTGGTTGACCTAAGGAGGGCCAATAATACGGAAATCATGCTAACTAAGGTTAAGATGCCACTCCCTGATATGATGGCTGCAGTACTGGCTTTGGATGACTCGGTATTAGATGTTGATCAGGTGGAAAATCTCATTAAGTTTTGTCCCACCAAAGAGGAAATGGAACTTTTGAAGGCATACACTGGTGACAAGGAGATTTTGGGGAAGTGTGAACAGTTTTTTTTGGAGCTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTCGCTTTCAAAATTCAGTTTCAGGCTCAGGTTACAGAATTTAGGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGAAAATCTGTCAAACTAAAGGACATCATGAAGAAAATTCTTTTTTTGGGTAATACATTGAATCAGGGAACAGCAAGAGGATCTGCAGTTGGATTTAAGTTGGATAGTCTTTTAAAGCTCACTGACACTCGTGCTTCTAACAATAAGATGACACTGATGCATTATCTTTGCAAGGTGCTAGCTGAAAGGTCGCCTGGACTCCTTGACTTTCACAAAGACCTTGTTAGTCTGGAAGGTGCCACTAAGATACAATTGAAATCATTAGCAGAAGAGATGCAGGCAATCACCAAGGGGTTAGAAAAGGTTAAACAAGAGCTTGCCGGATCGGAAAATGATGGACCTGTGTCAGAAGTTTTCTGTAAGACGTTGAAAGGATTCATTACGGTAGCTGAGTCAGATGTGGCAGATCTAATAACACTATATTCTACGGTGGGTAAAAATGCAGATGCACTTGCACAGTATTTTGGCGAGGATCCTGCTCGATGCCCATGTGAGCAAGTTACTGCAACTCTATTAAATTTTATAAGGTTGTTCCGGAAAGCACATGAAGAGAATTGCAAACAAGCAGAATTAGAAAAGAAGAAAGCCGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCGTTAACTTAACAAAGAAGAGTGCAAAAGATAGTTGA 4644 0.464 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYRVYMGGVVAQLQDHFPEASFMVFNFREGERRTQVSDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYTGEQKTLEMVYKQAPRELLHLLTPLNPQPSQFRYLQYISRRHLGSEWPPSETPLYLDCLILRDLPVFDDGKGFRPVVRVYGPDPSKPANRSSKLLFSTSNSKKHARHYQQAECMLVKIDIHFRVQGDVVLECINLNEDFTGEETMFRIMFHTAFVRSNILMLNRDEIDILWNAKDQYPKDFKAEVLFLDADAVIPDVNTVMVCEDANETESADIENASPEEFYEVEEIFSNAIDAQESKANDDSHTLHDNAVGGENRKGILREDSDPHAFQDCTPDYGILKQVGKMDSGINAVKDISVDDVNYKFNESMDSDPQAVKDIAMDDGEIKSTSTAITYDMTIPLEIKEIPEDADRGSDIMQNKFDEDNEATEKELDYREGQPMTDSSKQKSGKLIPSTAKKQFPSNSKPGDTVGKQKIKETAAFQAKQAKPTAVTRWIPSNKGSYTNSMHVYYPPSRINSAPPGLSNLTTSKEKMEDNKARSSSASFGSVAVVSADMKNDLKSRKLATSKSLGHTVSEIDAKCPPSPPSKETSLKSATQAEEQSSEQLLQPPPRPSPPPPPPPPPPPPLTSFSRQDIRVNLQPATSLSLPPPPPPPPSWKFVASSIVGETYGSLPLSPPTLPFASSEITSKFSEVSTAAAPSRPPPPPPPPPPIPHPRYEVSTIPPPPPPPPTVPPTKHGISSIPLPPPPPPSFPMSSLNMSPFSPPPIASHKAPPPPPPPPPPFANSYIGSPTPPLPPPPPPPFTNASPATPPPPPFTNAPPTMPPPPPPPPPPPPFTSAPPVPPPPPPPPFSASQSTFTPFSRAPPPPPLPPSGGSPPPPPPPPPPMSRAPPPPPPPPPMSGAPPPPPPPPMSRAPPPPPPPMYGAPPPPPPPMSRAPPPPPPPMSRAPPPPPPPMSRAPPPPPPMHGAPPPPPPPGGRGPPPPPPPSGRGPPPPPPPGGRGPPPPPLRGGAPPPPPPLGSKGASVGPARPGPVAPGRGGYARPSAVAPRRSSLKPLHWSKVTRALQGSLWEELQRHGELQIAPEFDVSELEKLFSANVPKPTDSSGKSGGRRKSTGSKPDKVHLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDDSVLDVDQVENLIKFCPTKEEMELLKAYTGDKEILGKCEQFFLELMKVPRVESKLRVFAFKIQFQAQVTEFRKSLNTVNSACEEVRKSVKLKDIMKKILFLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAERSPGLLDFHKDLVSLEGATKIQLKSLAEEMQAITKGLEKVKQELAGSENDGPVSEVFCKTLKGFITVAESDVADLITLYSTVGKNADALAQYFGEDPARCPCEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGVNLTKKSAKDS 1547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04251 1547 MobiDBLite consensus disorder prediction 1524 1547 - -
Trre15g04251 1547 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 949 1110 - -
Trre15g04251 1547 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1208 1535 - -
Trre15g04251 1547 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 1185 1209 - -
Trre15g04251 1547 PANTHER FORMIN-J 1058 1541 - -
Trre15g04251 1547 FunFam Formin-like protein 1131 1519 - -
Trre15g04251 1547 Gene3D Protein tyrosine phosphatase superfamily 14 201 IPR029021 -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 580 617 - -
Trre15g04251 1547 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1132 1533 IPR015425 -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 778 1140 - -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 732 746 - -
Trre15g04251 1547 Coils Coil 1414 1441 - -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 696 717 - -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 786 843 - -
Trre15g04251 1547 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Trre15g04251 1547 SMART it6_source 705 1547 IPR015425 -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 675 695 - -
Trre15g04251 1547 Coils Coil 1508 1542 - -
Trre15g04251 1547 Gene3D - 202 341 - -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 1187 1201 - -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 530 558 - -
Trre15g04251 1547 Pfam Formin Homology 2 Domain 1138 1507 IPR015425 -
Trre15g04251 1547 Gene3D Formin, FH2 domain 1130 1519 IPR042201 -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 854 942 - -
Trre15g04251 1547 SMART PTEN_C2_2 198 338 IPR014020 -
Trre15g04251 1547 CDD PTP_PTEN-like 16 190 - -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 651 747 - -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 496 529 - -
Trre15g04251 1547 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Trre15g04251 1547 MobiDBLite consensus disorder prediction 496 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04251 Trre-Chr15 53140684 53150742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04251 1 629 FH2 protein (formin) Gene Family AT5G07740 60.849 0.0 763
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04251 - - psat:127073762 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04251 15 53140684 53150742 Trre15g04251 15 53140684 53150742 ECH