Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04244 ATGTGTTTCTTTTTGGATCCTGCTCGATTCCCATGTGAGCAAGATACTGCAACTCTATTAAATTTTATAAGGTTGTTCCGGAAAGCACATGAAGAGAATTGCAAACAAGCGGAGTTAGAAAAGAAGAAAGCTAGGAAAGAGGCTGAAATGGAGAAGGCTAAGGGAATAAACTTAACAAAGAAGAGTGTAAAAGATAGTTGA 201 0.3731 MCFFLDPARFPCEQDTATLLNFIRLFRKAHEENCKQAELEKKKARKEAEMEKAKGINLTKKSVKDS 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04244 66 Gene3D Formin, FH2 domain 1 61 IPR042201 -
Trre15g04244 66 PANTHER FORMIN-J 6 61 - -
Trre15g04244 66 Coils Coil 27 56 - -
Trre15g04244 66 SUPERFAMILY Formin homology 2 domain (FH2 domain) 3 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04244 Trre-Chr15 53081770 53084325 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04244 3 66 FH2 protein (formin) Gene Family AT5G07740 81.250 2.75e-26 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04244 - - psat:127073762 89.7373