Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04170 ATGTGTTACATTACACTTCCATCTGTCAATCCATCACTCGAATCCCTAAATTCCAAAATCCATAAATCATTCTCTCCAATCGTAACCATTCTGTTCAATTTCTTCACTTCAAATCGACGCTGCTTCAAATTCGTTACAAGTTCAGATACAGTAGTCATTGTTTCAATAATAGTTCCAGCGGGTTTCTTCAGCATACAAAAGTTTGGTACCACTAAAATGGGATTCTTGTTTTCTCCCATACTTGCTTTATGGTTCATTGCTCTTGGTTCTGTTGGAATTTATAATATAGTTATGAATGATATTTATGTCCTAAGAGCAATCAATCCAGCTTATATTTATTATTTCATTAAGAAGAATGGCAAAAGGGCTTGGCCAGCTCTTGGTGGTTGTGTTCTTTGTGGTAGAGGTAAATCTTTTTTTATATGGTTTCCAACCATTAGTACTGCAGTTGATTAA 456 0.3487 MCYITLPSVNPSLESLNSKIHKSFSPIVTILFNFFTSNRRCFKFVTSSDTVVIVSIIVPAGFFSIQKFGTTKMGFLFSPILALWFIALGSVGIYNIVMNDIYVLRAINPAYIYYFIKKNGKRAWPALGGCVLCGRGKSFFIWFPTISTAVD 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04170 151 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 46 136 IPR003855 GO:0015079|GO:0016020|GO:0071805
Trre15g04170 151 Pfam K+ potassium transporter 48 136 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04170 Trre-Chr15 52287991 52289529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04170 48 138 Inorganic Solute Cotransporters AT1G60160 54.945 9.61e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04170 K03549 - mof:131144341 129.028