Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04123 ATGGACTCTATTATCATTCAAGCTAATTATAGAGATAAGTATCCTGTGCATGGATGTTGGGAGGAAATTTGCAGGCTACAATATCAAATATGGATGATGGAAGAAGAACTTCATGTTGTTTATCAACAGCTTGAAATTTGCAGGCAACAACAACAACAGTTACCTCATGATGATGTGACTTCACAGTTAGAATTGGGAATGGCGCCGCGTTCGTCCAATGCGCTCGCACTCTTTAATCAAACTCCACAACCACAGAGTTATAATATTAACAATAATAATACAGTGGCTGCTCCTTTGTCTGTATCTCAGCAACATTCTTACTCCAACAGCAATAGTGTGGATTATAATAACTCACCCCTTTACATGGATTCAAAGGATAATGCTACAAATCCTAATTTGTGGATTCAGTGCCCTTACACAAGTAATAATAGCAATTCAATAACAATGCAACCTCATCAGTTGATTGCCTCAGAGTCGCAACCACTGTCATCTGTCCAACAAGGAGTTGTTGAAGACAATTATGATGAAATGCATTCATTTTTTGATACAGTTGATGATAGGCAATCATACATTTATTCTAAGGAGGCTTATGAATCAAGTTCGGAAGAATCACTGAAAGATACAAGAAAGTGCACAGAGCATGTTTCTGAGAATGAACTGAAGAGTGCTGCTGCTTGTTTCAGCCTTACCAGTGTCAATTGA 702 0.3803 MDSIIIQANYRDKYPVHGCWEEICRLQYQIWMMEEELHVVYQQLEICRQQQQQLPHDDVTSQLELGMAPRSSNALALFNQTPQPQSYNINNNNTVAAPLSVSQQHSYSNSNSVDYNNSPLYMDSKDNATNPNLWIQCPYTSNNSNSITMQPHQLIASESQPLSSVQQGVVEDNYDEMHSFFDTVDDRQSYIYSKEAYESSSEESLKDTRKCTEHVSENELKSAAACFSLTSVN 233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04123 Trre-Chr15 51770935 51771972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04123 1 196 AS2 family AT3G47870 30.252 1.95e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Trre15g04123 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04123 15 51770935 51771972 Trre15g04123 15 51770935 51771972 ECH