Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04100 ATGTGGAATATTTTGAGAGAAGAACTAGTATTTGTAGGGCAAAACTATTATGACATAACCATAGTCTTATTTCTCTCTATAGGATTAACATATATTGCTTCAAGAGCTTGGATAAGAGCTACAACAAATAGAGAAGATATCCCTGGTCAACTTGGATTACCTCTTATTGGAGAGACTTTTTCTTTTCTTTCAGCCACTAATAGTACAAGAGGATGCTATGATTTTGTTAAACTTAGACGATTGTGGCATGGGAGATGGTTCAAGACAAGGTTATTCGGAAAGGTCCACATATTTATTCCTAATCCTGAAGGTGCAAGGACAATATTTGCTAATGACTTTGATCAATTCAACAAAGGTTATGTAAAATCAATGGCTGATGCCGTAGGAAAGAAAAGCTTATTATGTGTGCCTGTTGAGAGCCACAAAAGAATAAGGCGTCTTCTATCTGAACCATTCTCCATGACTTCCCTATCTGCATTTATCACAAAGTTTGATAAATTGTTGTGTGGAAGGCTTCAAGGCGGGAAGAGTTTCAAGGTGTTGGACTTCTGCATGAAGATCACATTTGATGCAATGTGTGGTATGCTGATGAGCATCACGGACGATTCCTTACTACGACAGATCGAGAAAGACTGCACTGCTGTCTCTAATGCCATGTTGTCTTTCCCAGTCATGATTCCTGGAACCAGATACTATAAAGGCATCATGGCTCGTAAAAGGCTCATGGAAACCTTCAGAGAGATCATTGCTAGACGTAGGATGGGAGAAGAGTCTACAGGGGACTTCCTGCAGTCCATGTTGCAGAGAGACTCATTACCAGCCAGTGAAAAGCTTGATGACTCAGAGATTATGGATAATCTTTTGACATTAATAATTGCTGGACAGACTACTACAGCAGCAGCAATGATGTGGAGTGTAAAATTTCTACATGACAACATTGATGCACAGGATATACTCAGGGAAGAACAACTGTCTTTAACCAAAATGAAGCCAGAAGGAGCTTCACTTAATCATGAAGATATCAACAACATGCGTTATGGTTTGAAGGTAGTTAAGGAAACACTGAGAATGGCTAATGTCCTATTATGGTTTCCTCGCGTTGCACTTAACGATTGTACAATTGAAGGGTATGAAATAAAGAAAGGTTGGCACGTTAACATTGATGCAACTTGTATACATTACGACTCAGATCTTTTCATTGATCCGTTGAAATTTAACCCACAAAGATTTGATGAAATGCAAAAGCCCTACAGTTTCATACCCTTTGGATCAGGACCTAGGACTTGCCTTGGCATGAATATGGCAAAAGTGACAATGCTGGTCTTTTTACACAGACTAACTAGTGGTTACACGTGGACCCTTGATGATTTAGATACTTGCTTAGAAAAGAAGGCACACATACCTAGACTAAGGAGTGGCTGTCCAATAACGTTGAAGTCCATAAGCAAGAGCATGCCGGAGGCATAA 1467 0.3967 MWNILREELVFVGQNYYDITIVLFLSIGLTYIASRAWIRATTNREDIPGQLGLPLIGETFSFLSATNSTRGCYDFVKLRRLWHGRWFKTRLFGKVHIFIPNPEGARTIFANDFDQFNKGYVKSMADAVGKKSLLCVPVESHKRIRRLLSEPFSMTSLSAFITKFDKLLCGRLQGGKSFKVLDFCMKITFDAMCGMLMSITDDSLLRQIEKDCTAVSNAMLSFPVMIPGTRYYKGIMARKRLMETFREIIARRRMGEESTGDFLQSMLQRDSLPASEKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLHDNIDAQDILREEQLSLTKMKPEGASLNHEDINNMRYGLKVVKETLRMANVLLWFPRVALNDCTIEGYEIKKGWHVNIDATCIHYDSDLFIDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGMNMAKVTMLVFLHRLTSGYTWTLDDLDTCLEKKAHIPRLRSGCPITLKSISKSMPEA 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04100 488 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04100 488 PRINTS E-class P450 group I signature 282 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04100 488 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04100 488 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04100 488 FunFam cytochrome P450 90A1-like isoform X1 38 481 - -
Trre15g04100 488 PANTHER CYTOCHROME P450 26 48 453 - -
Trre15g04100 488 SUPERFAMILY Cytochrome P450 37 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04100 488 Gene3D Cytochrome P450 39 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04100 488 CDD CYP90-like 79 478 - -
Trre15g04100 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Trre15g04100 488 PRINTS P450 superfamily signature 293 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04100 488 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04100 488 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04100 488 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04100 488 Pfam Cytochrome P450 48 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04100 Trre-Chr15 51532823 51536314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04100 48 453 Cytochrome P450 AT1G19630 46.005 9.86e-124 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04100 - - gmx:100789430 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04100 15 51532823 51536314 Trre15g04100 15 51532823 51536314 ECH