Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04080 ATGAATTTGACTAAGAACATTTGGAAAAATGAGGGCATTCGCGGCATTTATCGAGGATTTGGCATCACTGTTCTTAGAGATGCACCTGCTCATGCCTTCTACTTTGGGACATATGAGTACTTGAGGGAGAAACTTCACCCTGGTTGTAGAGAAAATTGTGAAGAAAGTGTGAGTACTATGTTTATAGCAGGAGGATTAGTAGGGATATCAAGTTGGATTTTCAACTACCCTACAGATGTTATAAAGACAAGATTACAGGCTCAAACATCTTCTTCAATGAAATACAAAGGTATCTTAGATTGTACCTTAAAGATAATTAAAGAAGAAGGCTCTATTGTGCTATGGAGGGGTTTAGGAGCTACAATTGCTAGAGCCTATGTTATGAGTAGTGGTATATTTCCTGTTTATCAAATTGCTCTAAGTGAGATGATTGCTTATGCTAAACTCTACTCTGGTGCCATGTTATGTTTTGTAGATATTTACGTTCCACAAACTCGAAAAAAGTAG 507 0.3708 MNLTKNIWKNEGIRGIYRGFGITVLRDAPAHAFYFGTYEYLREKLHPGCRENCEESVSTMFIAGGLVGISSWIFNYPTDVIKTRLQAQTSSSMKYKGILDCTLKIIKEEGSIVLWRGLGATIARAYVMSSGIFPVYQIALSEMIAYAKLYSGAMLCFVDIYVPQTRKK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04080 168 Gene3D Mitochondrial carrier domain 1 162 IPR023395 -
Trre15g04080 168 SUPERFAMILY Mitochondrial carrier 3 136 IPR023395 -
Trre15g04080 168 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 44 IPR018108 -
Trre15g04080 168 Pfam Mitochondrial carrier protein 56 138 IPR018108 -
Trre15g04080 168 Pfam Mitochondrial carrier protein 2 45 IPR018108 -
Trre15g04080 168 ProSiteProfiles Solute carrier (Solcar) repeat profile. 55 142 IPR018108 -
Trre15g04080 168 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 2 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04080 Trre-Chr15 51335561 51336067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04080 1 140 Antiporters AT1G79900 54.286 4.15e-54 171