Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04044 ATGTCTAACTCACACTTAATTTTCTGTTTTCTTTCTTGCATTCTTGCTATCACTTTGATCTTCATTTTTTTCATCAAAAAAAAGAAAACAAAGTTTAATCTTCCACCTGGAAAAATGGGATGGCCCTTTATTGGAGAAACCATTGGTTATTTGAAGCCTTACACTGCCACCACAATGGGAGAATTTATGGAAAATCACATAGCAAGGTATGGTACAATTTACAAGTCAAAATTGTTTGGAGGACCAGCTATTGTATCAGCAGATGCAGAATTGAACAGATTCATATTACAAAATGATGGAAAATTATTTGAGTGTAGCTATCCTAAAAGCATTGGTGGTATACTTGGAAAATGGTCAATGTTGGTTTTAGTAGGTGACATGCATAGGGACATGAGGAATATTTCACTAAACTTTATGAGCTATGCTAGGCTTAAAACCCATTTTTTGAAAGATATAGAGAATCACACTCTTTTGGTTCTTAGCTCTTGGAAAGAAAATTGTACATTTTCAGCTCAAGGTGAAGCAAAAAAGTTCACCTTCAACTTGATGGCCAAACAAATTATGAGTTTGGATCCATGGAATCTTGAGACAGAACAGTTGAAAAAAGAGTATGTCTCTTTCATGAAAGGTGTTGTTTCTGCTCCTTTAAATTTGCCAGGAACTGCATACAGGAAAGCATTAAAGTCTAGGAATACCATATTGAAGTTCATAGAGAGGAAAATGGAAGAAAGAAGAAAGAGAAACCAAGAAGAAAAAAAAGGGTTGGAGGAAAATGATCTTCTAAATTGGGTTCTAAAGCATTCAAATCTTTCCAATGAGCAAATTCTTGATTTGATTCTTAGCTTGCTTTTTGCTGGTCATGAAACTTCATGTGTAGCTATATCTCTAGCTATTTATTTTTTGCCTGGTTGTCCTCGAGCCATACAGCAATTAAGGGAAGAACATAGACAAATAGCCAGATCCAAGAAAGAAGAGGAGGTTGGATTAACTTGGGATGATTATAAAAAAATGGAATTTACTCATTGTGTTGTGAATGAAACACTTCGGTTGGGAAATGTTGTGAGGTTCCTTCACAGGAAGGCTATCAAAGATGTCCATTACAAAGGTTATGACATTCCATGTGGATGGAAAGTACTTCCGGTGATTTCAGCTGTGCATTTGGATCCTTCAAATTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGGGCAATAGTAAAAGTGGAAATTGTGCAAACACAACAAGCAATAATTTCATGCCATTTGGAGGAGGACCAAGGCTATGTGCAGGATCAGAGTTAGCTAAACTTGAAATGGCTGTTTTCATTCACCATATCATCCTCAACTACAATTGGAACCTTGTCGATGTTGATCAACCTGTTGTATACCCTTTTGTTGATTTTCCTAAAGGTTTACCTATCAGAGTCCAAAGCCAATGCCACTCTTTAATATGA 1458 0.3635 MSNSHLIFCFLSCILAITLIFIFFIKKKKTKFNLPPGKMGWPFIGETIGYLKPYTATTMGEFMENHIARYGTIYKSKLFGGPAIVSADAELNRFILQNDGKLFECSYPKSIGGILGKWSMLVLVGDMHRDMRNISLNFMSYARLKTHFLKDIENHTLLVLSSWKENCTFSAQGEAKKFTFNLMAKQIMSLDPWNLETEQLKKEYVSFMKGVVSAPLNLPGTAYRKALKSRNTILKFIERKMEERRKRNQEEKKGLEENDLLNWVLKHSNLSNEQILDLILSLLFAGHETSCVAISLAIYFLPGCPRAIQQLREEHRQIARSKKEEEVGLTWDDYKKMEFTHCVVNETLRLGNVVRFLHRKAIKDVHYKGYDIPCGWKVLPVISAVHLDPSNFDQPQHFNPWRWQGNSKSGNCANTTSNNFMPFGGGPRLCAGSELAKLEMAVFIHHIILNYNWNLVDVDQPVVYPFVDFPKGLPIRVQSQCHSLI 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04044 485 FunFam Cytochrome P450 90B1 24 479 - -
Trre15g04044 485 SUPERFAMILY Cytochrome P450 31 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 PANTHER CYTOCHROME P450 26 31 461 - -
Trre15g04044 485 Pfam Cytochrome P450 35 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 Coils Coil 238 258 - -
Trre15g04044 485 CDD CYP90-like 66 477 - -
Trre15g04044 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Trre15g04044 485 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 Gene3D Cytochrome P450 24 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre15g04044 485 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04044 Trre-Chr15 50934562 50943420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04044 26 408 Cytochrome P450 AT3G50660 72.099 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04044 K09587 - gmx:100802498 770