Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04029 ATGGGTGTCATACGAGTCCTCTCCACGGATACAATCAAGGCACCAAAATCAAGTGATCATGAAATAGATTTGACTCCATGGGATCTTCGGTTTCTACATGCTTCAACCAACAAAAAGGGTCTTCTTTATCACCATCAGGTAGTGGCAAACCAAATCGAACGGCTAAGACACTCTTTATCCTCTGCTCTTGCCTTTTTCCAACCTGTTGCTGGCCGTCTCAAAATAACGGAACACGAAGACAACATGGTCTCGTGTTCCGTAACATGCAACAATGCAGGTGTTCTCTTTATCCATGCGATAGCGGAGAATACTTGTGTTGCTGATATCGTAGGACCCACATACGTTCCTCCAATTGTCGATTCATTTTTTGCTTTCATCGGAGATAAAAACTACGAAGGCACGTCAAAACCATTGTTGGGAGTTCAAGTTACAGAGCTAGTTGACGGCGTCTTCATTGGTTGCACATTCAACCATGTTGTTGCTGACGGAAAGTCACTGTGGCATTTCATTAATTCATGGGCTGAAATTTCACGCAATTGTTGTCATCATCAAATATGCAAACTCCCAACACTCGAGCGTTGGTTTCCAAATGGTATTCAACGTCCCATACAATTTCCTTTCACTATGGAGCCGCAAAAGAATCACTTTGATGACGAGAAACTCTGTTTATCACATAGGGTATTCCACTTCCCAAAGGAGAAAATCATGCAACTGAAATCAAAAGTCAACGCAAAGACTAGTACCATCAAAATATCTTCTCTACATACAAGCACTTTTAACTCACCTTTGGTGCTCCATGATCCGGTCCAAACAATTTGA 819 0.42 MGVIRVLSTDTIKAPKSSDHEIDLTPWDLRFLHASTNKKGLLYHHQVVANQIERLRHSLSSALAFFQPVAGRLKITEHEDNMVSCSVTCNNAGVLFIHAIAENTCVADIVGPTYVPPIVDSFFAFIGDKNYEGTSKPLLGVQVTELVDGVFIGCTFNHVVADGKSLWHFINSWAEISRNCCHHQICKLPTLERWFPNGIQRPIQFPFTMEPQKNHFDDEKLCLSHRVFHFPKEKIMQLKSKVNAKTSTIKISSLHTSTFNSPLVLHDPVQTI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04029 272 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 254 - -
Trre15g04029 272 Pfam Transferase family 7 246 - -
Trre15g04029 272 Gene3D - 2 204 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04029 Trre-Chr15 50738868 50739686 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04029 55 253 Monolignol Biosynthesis Gene Families AT5G48930 27.442 5.26e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04029 - - mtr:11437827 298.13