Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04028 ATGTTTATTGCTATTGGAGTTAGACCGAGATTTGTTCCACCATTGCCAGAAGATTATTTTGGAAACGCAATTATAAGTTGTGTGGTTAAAATGAAAGCCGGAGAGTTGTTGGAGGAAGGTGGACTTTGTAAAGGCGCTCGCGAGATGAACAAGGTAATTGCTTCACATTCTGATGAGAAGTTGAAGAATCAATACGAGTCTTGGTTAAGAAATCCAACCTTTGTTGGGCAAGTTAGCACGACCGATAATAATTTATTACTCATCATTAGTAGTTCTCCTTTGTTTGATGTTTATGGTAATGATTTTGGATGGGGAAAGCCTGTGGCAGTTCGTAGTGCATATAAAATTAATGGATTTGTTAGTGTCTTTGCTGGAAGAGAAGAAGGCAGTATTGACCTTCAAGTATGCCTTCCTTACAAGATTTTGCAGGCAATGGAAAATGACTGTCAATTCATGGATGTTGTGTCCAATTAG 474 0.384 MFIAIGVRPRFVPPLPEDYFGNAIISCVVKMKAGELLEEGGLCKGAREMNKVIASHSDEKLKNQYESWLRNPTFVGQVSTTDNNLLLIISSSPLFDVYGNDFGWGKPVAVRSAYKINGFVSVFAGREEGSIDLQVCLPYKILQAMENDCQFMDVVSN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04028 157 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 2 152 - -
Trre15g04028 157 Pfam Transferase family 1 151 - -
Trre15g04028 157 Gene3D - 1 151 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04028 Trre-Chr15 50738372 50738845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04028 1 108 Monolignol Biosynthesis Gene Families AT5G48930 29.091 7.72e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04028 - - vun:114175486 173.326