Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04025 ATGAGAGTTCCTCCTCCTGCGGCTTCTTCATCTTCATCAACATCTTCACCGCAACAACCAAAACTCACCACCCAAAATATCCTTGTTCCCACTCCCAATAACCCGGCGACAACATCAACAACCACCACCACCACCACTGCCACCTTGTGCTACGAACCACGGTCCGTCCTCGAACTTTGTCGTAGTCCTAGCCCAGAAAAGAAACCAACCCAACAAGAACAATCGCAACAACAACATAACAATCACGAAGTGGAAGAAGAAGAAGATCATGCTTCCTTGCCTAATTTGGATTGGTGGGATTCCATCATGAAAGATTTGGGTTTACAAGACGACTCTTCAAATCCCATAATACCTCTTTTGAAAAATACCAATAATACCCCTGAAATTTACCCTAACCCTTCTCAAGACCAATTTGATCACACTCAAGATTTCACTTCTCTCTCAGATATTTACTCTAATAATCAAAACCTGGCCTATAATTACCCTAACACAAACACTAATCTGGATCATTTGGTTCATGACTTCAACAATAACAATAATCCACAACCAAATAGCAACAGTAATTGGGATTTCATTGAAGAACTTATTCGCGCCGCGGATTGCTTCGATAACAATCAACTTCAATTCGCTCAAGTGATACTAGAACGGCTCAATCAACGGTTAAGATCGCCTACTGGTAAGCCGCTACACCGAGCGGCGTTTCATTTCAAAGATGCTCTTCAGTCTCTTCTTTCCGGTTCAAACCGGACTAATCCGCCTCGTCTTTCATCCATGGTGGAGATTGTGCAAACAATAAGAACGTTTAAGGCATTTTCTGGAATTTCACCGATTCCAATGTTTTCAATTTTCACCACAAATCAAGCGTTACTCGAAGCTCTTCATGGATCGTTATTCATGCACGTTGTTGATTTTGAAATTGGACTTGGAATTCAATACGCTTCTCTTATGAAAGAGATTGCTGAAAAAGCTGTTAACGGTTCACCGTTACTTCGTATCACCGCCGTCGTGCCGGAGGAGTACGCCGTTGAAAGTAGGCTTATTCGTGAGAATCTGAATCAGTTTGCGCATGACCTTGGGATTCGTGTTCAGGTTGATTTTGTACCGTTAAGGACTTTTGAAACGGTGTCGTTTAAGGCTGTGAGATTTGTTGACGGTGAGAAGACTGCGATTCTGTTAACGCCGGCGATTTTCTGTCGCCTTGGATCCGACGGTACAGCCGCGTTTCTTTCCGATGTTCGGAGGATAACTCCTGGTGTGGTGGTTTTTGTTGACGGGGAAGGATGGACGGAGGCGGCTTCGGCGGCGTCATTTCGCCGTGGAGTTGTGAATAGCTTGGAGTTTTATTCTATGATGCTGGAGTCGTTGGATGCGTCGGTGGCGGCCGGAGGTGGAGGAGAGTGGGCGCGGAGGATCGAGATGCTTCTGCTTCGGCCAAAGATTATTTCAGCGGTGGAAGCTGCTGGAAGGAGAACGACGCCGTGGAGAGAGGCGTTTTACGGCGCCGGAATGAGGCCGGTACAGTTGAGTCAGTTTGCGGATTTTCAGGCAGAGTGTTTGTTAGCGAAGGTGCAAATCAGAGGCTTCCACGTGGCGAAACGACAGACTGAGTTGGTGCTTTTCTGGCATGAGAGGGCCATGGTTGCCACGTCAGCTTGGCGATGTTAG 1665 0.4643 MRVPPPAASSSSSTSSPQQPKLTTQNILVPTPNNPATTSTTTTTTTATLCYEPRSVLELCRSPSPEKKPTQQEQSQQQHNNHEVEEEEDHASLPNLDWWDSIMKDLGLQDDSSNPIIPLLKNTNNTPEIYPNPSQDQFDHTQDFTSLSDIYSNNQNLAYNYPNTNTNLDHLVHDFNNNNNPQPNSNSNWDFIEELIRAADCFDNNQLQFAQVILERLNQRLRSPTGKPLHRAAFHFKDALQSLLSGSNRTNPPRLSSMVEIVQTIRTFKAFSGISPIPMFSIFTTNQALLEALHGSLFMHVVDFEIGLGIQYASLMKEIAEKAVNGSPLLRITAVVPEEYAVESRLIRENLNQFAHDLGIRVQVDFVPLRTFETVSFKAVRFVDGEKTAILLTPAIFCRLGSDGTAAFLSDVRRITPGVVVFVDGEGWTEAASAASFRRGVVNSLEFYSMMLESLDASVAAGGGGEWARRIEMLLLRPKIISAVEAAGRRTTPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRQTELVLFWHERAMVATSAWRC 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04025 554 Pfam GRAS domain family 192 553 IPR005202 -
Trre15g04025 554 ProSiteProfiles GRAS family profile. 182 553 IPR005202 -
Trre15g04025 554 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 156 548 IPR005202 -
Trre15g04025 554 MobiDBLite consensus disorder prediction 1 92 - -
Trre15g04025 554 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04025 Trre-Chr15 50703260 50704924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04025 89 553 GRAS Transcription Factor Family AT4G36710 55.236 1.59e-167 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trre15g04025 GRAS 5.6e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04025 - - cam:101510420 910.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04025 15 50703260 50704924 Trre15g04025 15 50703260 50704924 ECH