Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04016 ATGTGTGATGCCACCAAAAGTGGGGATGAAACCAATAAACTTTATATTGTATACATGGGCTCACTTCCTAAAGAAACATCTTATTCTCCATCTTCTCACCATCTTAGCATGTTGCAACAAGTTATTCATGGTAGTGATATAGAAAATCGCTTGGTCCAAAGTTACAAAAGGAGTTTTAATGGTTTTTCTGTCATACTCAATGATCAACAAAGGGAAAAAATTGTTAGCATGAAAGGTGTTGTCTCAGTGTTTCCAAGCCAAGAGTATTACCTTCAAACCACAAGATCGTGGGACTTCCTTGGTTTACCTCAATCAATCAGAAGAGGTAAAACTATTGAAAGTGATTTAGTGATTGGAGTCTTAGACACCGGCATTTGGCCAGAATCTAAAAGTTTTCACGATAAAGGTCTTGGTCCTATTCCCAAAAAGTGGAGGGGAGTTTGTGCAGGCGGTGGTAACTTCAGTTGCAACAATAAGATCATTGGAGCTCGATGGTACCTTGGTAGTGAGGGTGAGAGTGCAAGAGATCATCGTGGTCATGGAACACATGTTGCATCAATAGTGGGCGGAAGAAGGATAAAGGGTGTGAGCTATCATGGTCTTGCAAAAGGCACTATAAGAGGTGGAGTTCCATCTTCAAGGATTGCTGTATACAAAGTTTGTAATCCAAAATGTCGTGGTGATAATATTTTAGCAGCTTTTGATGATGCCATTGCCGATGGAGTTGACATCATTAGCATATCTATTGGAAATGAAAATGTTGTTGAATTTATTAAAGATACTCTTGCTATTGGTTCTTTTCATGCCATGGAAAAAGGAATACTCACAGTGCAGGCATCAGGCAACTTAGGTCCAAACCCAGGTACTATTTCAAGTGTAGCACCTTGGTTATTTAGTGTTGCCGCAACTACCATAGATCGTCAATTCATTGATAAACTCATTCTTGGAAATGGAAAGACTTTTATTGGGAAATCGATTAATGTTGTCTCCTCAAATGGCACAAAATTTCCGATAGTTGTGTGTAATGCTACGGCTTGCCATGGAGATTATACATCCCCTGAAAAATGTCCATGTATAGACAAAAAACTGGTAACAGGTAAGATTGTTTTGAGTGGAGATATATATGGTGGAAATTTGGCTTATCCGTATGGGGCAATTGGTTCGATCCTTAATTTTACATATGATGCTTCTACTATCACTCATCGACCTTCACTTAACTTGGATTCAAAAGACTTTGATCTTGTTCAATCTTACACTTACTCCACTAAATACCCTGTAGCTGAAATATTGAAGAGTTATGCCGTTCAAGACATCACTGCTCCTAAAATTGCATCTTTCTCTTCTCGTGGTCCAAATCCTATTGTACCAGAAATTATGAAACCAGACATAGGTGCCCCTGGAGTCGATATTTTGGCTGCATATTCACCTAACGGACCAATCCCTGATGAGATTATTTATAATGTACATGAGAAATACATTATAGCATCTGGTACCTCTATGGCATGTCCCCATGTTGCTGGAGTTGCCGCATATGTCAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCGGCCATCATGACCACAACGAAACCAGTGAACGATACTTATAATGATATGGTAGGTGAGTTTGCTTATGGATCTGGAAATATCAATCCACAACAAGCTCTTCACCCTGGATTGATTTATGACATCACTAAGCAAGATTATATGCAAATGCTTTGTAATTTTGGTTATAATGATACCAAAGTTGAACAAATTAGTGGAGAAAAATCAAGTTGCCATGAAGCTTCAAATAGATATTTGGTGAAAGATATAAATTATCCTGCGCTGGTGATTCTTGTCAGGCCTCATAAGCATTTTAGTGCTAAGATTCATAGAACAGTGACAAACGTTGGCTCTCCTAACTCAAGCTACACGGCTACTATCATCCCAATTCCAAAAATCAAGATTAAAGTGGTGCCAGAACTTCTCTCATTCAAATCCTTGCATGAGAAACAATCATTTGTTGTCATTGCTACTGGAGAAGCAAAATCAAATCAAACTATGTTTTCTTCATCACTTGTTTGGTCTGATGGAACCCACAATGTGAAAAGTCCAATTATTATACAAATACTCTCTTAA 2130 0.3831 MCDATKSGDETNKLYIVYMGSLPKETSYSPSSHHLSMLQQVIHGSDIENRLVQSYKRSFNGFSVILNDQQREKIVSMKGVVSVFPSQEYYLQTTRSWDFLGLPQSIRRGKTIESDLVIGVLDTGIWPESKSFHDKGLGPIPKKWRGVCAGGGNFSCNNKIIGARWYLGSEGESARDHRGHGTHVASIVGGRRIKGVSYHGLAKGTIRGGVPSSRIAVYKVCNPKCRGDNILAAFDDAIADGVDIISISIGNENVVEFIKDTLAIGSFHAMEKGILTVQASGNLGPNPGTISSVAPWLFSVAATTIDRQFIDKLILGNGKTFIGKSINVVSSNGTKFPIVVCNATACHGDYTSPEKCPCIDKKLVTGKIVLSGDIYGGNLAYPYGAIGSILNFTYDASTITHRPSLNLDSKDFDLVQSYTYSTKYPVAEILKSYAVQDITAPKIASFSSRGPNPIVPEIMKPDIGAPGVDILAAYSPNGPIPDEIIYNVHEKYIIASGTSMACPHVAGVAAYVKSFHPDWSPAAIKSAIMTTTKPVNDTYNDMVGEFAYGSGNINPQQALHPGLIYDITKQDYMQMLCNFGYNDTKVEQISGEKSSCHEASNRYLVKDINYPALVILVRPHKHFSAKIHRTVTNVGSPNSSYTATIIPIPKIKIKVVPELLSFKSLHEKQSFVVIATGEAKSNQTMFSSSLVWSDGTHNVKSPIIIQILS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04016 709 Pfam Fibronectin type-III domain 607 705 IPR041469 -
Trre15g04016 709 CDD Peptidases_S8_3 89 531 IPR034197 -
Trre15g04016 709 Gene3D - 576 708 - -
Trre15g04016 709 Pfam Subtilase family 114 551 IPR000209 GO:0006508|GO:0008236
Trre15g04016 709 Pfam Peptidase inhibitor I9 15 91 IPR010259 -
Trre15g04016 709 FunFam Subtilisin-like protease SBT1.5 115 315 - -
Trre15g04016 709 ProSitePatterns Serine proteases, subtilase family, histidine active site. 180 190 IPR022398 -
Trre15g04016 709 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 704 IPR045051 -
Trre15g04016 709 CDD PA_subtilisin_like 313 429 - -
Trre15g04016 709 Gene3D Peptidase S8/S53 domain 115 572 IPR036852 GO:0004252|GO:0006508
Trre15g04016 709 Gene3D - 306 436 - -
Trre15g04016 709 ProSiteProfiles Serine proteases, subtilase domain profile. 96 559 - -
Trre15g04016 709 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 92 IPR037045 -
Trre15g04016 709 SUPERFAMILY Subtilisin-like 91 563 IPR036852 GO:0004252|GO:0006508
Trre15g04016 709 PRINTS Subtilisin serine protease family (S8) signature 496 512 IPR015500 -
Trre15g04016 709 PRINTS Subtilisin serine protease family (S8) signature 113 132 IPR015500 -
Trre15g04016 709 PRINTS Subtilisin serine protease family (S8) signature 176 189 IPR015500 -
Trre15g04016 709 ProSitePatterns Serine proteases, subtilase family, serine active site. 497 507 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04016 Trre-Chr15 50582703 50586317 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04016 9 705 Subtilisin-like Serine Gene Family AT3G46850 51.690 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04016 - - psat:127076787 896.345