Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre15g03968 | ATGTTCTATCATCACAAGTCAAATCTTTATATTCTCATCATCATCATCATCATCATCATCACAATCTTCACTACAGTAATAACTGCTGATCAAAACAAAAATAACTGCAATCAAAGATGCGGTGAACAAATTGTAAATTATCCGTTCGGATTCTCCGATGACTGCGAAATTAAACTAAACTGCAGCATCAACAAAGAACTCAAAATTGATGAGTTAAAAGTTCAAGAAGTGAATTCTGATAGCATATTCATATCATTACCAGCAAAATGCAACCGTAGTACAAGTTTCATAGAGCCACTTTTCGGCAAAAACTTCGCTCCAACATGGAAAAACACGTTCCTTGTACAGAAATGTAATTCAAATCTTAGTGGTTGTGTTATTCCACCTTCGATTTTCATTGGAACAAACATAAATGTTGAAGGTTGTGATGATAAAACAAGAAGTGATAACATCACTTGCTTTACGCAATCGCAGCGTAAAAGAACGCGCGAGCACGAGGATGTTCTTACGGTTGATGATTGGAAAATAAATGGATGCAAATTCTTGTTTTCTTCTATTGCTGTTGATAGCAGTAAAATCAAAGAGGTACCAATTCAGTTTCAGGTGATTGAGTTGGGGTGGTGGCTTGAAGGTACTTGTGGATGTTCTGATGATGCTAATTGCACGAAGGTTCATTTTGACGGAGATAAACAGGGCTTCCGGTGTCGTTGCCGTGAAGGTTTCGTCGGAGATGGATTTGTCAACGGTATTGGTTGCCGGAGAGTTTCTCATTGCAGACCTTCAACATTTGGGTCTAGCAAATGTGGAAAAACACTCAGAATTGGTTTGCTTATTGGAGTGATCCTAGTTGGAGCCTCCGTGACGGCTGCCCTAGCAATGCTATGCTACTTCGCCAAGCGCCGTTCCACATGGCTGACAAAACAATTGACGGTAAAGCGCCTTTTAAGAGAAGCGGCAGGCAACTACATTGTTCCTCTCTACCCTTACAAAGAAATAGAAAAAGCCACAAATTTTTTCTCGGAGAAACACAGGCTAGGAACCGGTGCTTACGGCACGGTTTATGCAGGAAACCTTCACAATGATGAATTGGTTGCTATAAAAAAGATCAGGTATAGAGACACCAACAGTGTTGACCAAGTAATGAATGAGATCAAGCTCCTTTCTTCGGTTAGTCATCCGAATTTAGTTCGACTCTTAGGCTGCTGCATAGAAAAAGGAGAGCATATACTTGTTTATGAGTATATGGCAAATGGAACATTATCTCAACATTTACAACGAGAAAGAGGCGGAACACTTCCTTGGACAATAAGACTCACCATTGCCTCCGAAACTGCTAATGCTATAGCATTTCTCCACTCTTCAGATCCTCCAATTTATCATAGAGATATAAAATCTAGTAACATACTTTTGGACTTTAGCTTTCAATCAAAAGTAGCGGATTTCGGACTTTCTAGGTTAGGCATGACAGAAACATCACATATCTCAACCGCGCCACAAGGGACACCGGGTTATGTTGATCCACAATACCACCAAAACTTTCACCTTTCTGATAAAAGTGATGTATATAGTTTCGGAGTTGTTTTGGTAGAGATAATAACAGCAATGAAAGTGGTTGATTTCGGTAGACCTCAGAGTGAGATTAATTTAGCAGCACTCGCAGTGGAAAAAATTAGGAAAGGTCGTATCGACGATATCATAGATCCTTTCCTTGATCTAAATAGGGATGCTTGGACACTCTATTCTGTTAACAAGGTAGCCGAGCTTGCATTTAGATGCCTCGCTTTTCATAGCGAAGCAAGGCCTAGTATGATTGAAGTGGCTGGGGAGCTAGATAATATCAGACGTAGTGGATGGGCGACAATGGAGGAAACTATATGTATGGGATCGTCAGTTGGATCCGCCTGTTCATCGCCTCGTAATAATGGAAATGAGAATTTAGTTTCAAAGAATGAGATATCGGTTGTTCCACAAAAGACTAATAGTTTTTTGCATCCAATAGAGGAGGTAAAGGATAGTTCCCCTGTATCTATGCATGGTACTTGGTCAAGTAGACCGAGTTCACCTTCAACAAACAGCTTATTGGGAAATGTTATTCAGTGA | 2100 | 0.4014 | MFYHHKSNLYILIIIIIIIITIFTTVITADQNKNNCNQRCGEQIVNYPFGFSDDCEIKLNCSINKELKIDELKVQEVNSDSIFISLPAKCNRSTSFIEPLFGKNFAPTWKNTFLVQKCNSNLSGCVIPPSIFIGTNINVEGCDDKTRSDNITCFTQSQRKRTREHEDVLTVDDWKINGCKFLFSSIAVDSSKIKEVPIQFQVIELGWWLEGTCGCSDDANCTKVHFDGDKQGFRCRCREGFVGDGFVNGIGCRRVSHCRPSTFGSSKCGKTLRIGLLIGVILVGASVTAALAMLCYFAKRRSTWLTKQLTVKRLLREAAGNYIVPLYPYKEIEKATNFFSEKHRLGTGAYGTVYAGNLHNDELVAIKKIRYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEKGEHILVYEYMANGTLSQHLQRERGGTLPWTIRLTIASETANAIAFLHSSDPPIYHRDIKSSNILLDFSFQSKVADFGLSRLGMTETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFGRPQSEINLAALAVEKIRKGRIDDIIDPFLDLNRDAWTLYSVNKVAELAFRCLAFHSEARPSMIEVAGELDNIRRSGWATMEETICMGSSVGSACSSPRNNGNENLVSKNEISVVPQKTNSFLHPIEEVKDSSPVSMHGTWSSRPSSPSTNSLLGNVIQ | 699 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre15g03968 | 699 | CDD | STKc_IRAK | 345 | 613 | - | - | |
Trre15g03968 | 699 | ProSitePatterns | Protein kinases ATP-binding region signature. | 345 | 368 | IPR017441 | GO:0005524 | |
Trre15g03968 | 699 | PANTHER | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 | 14 | 682 | IPR044652 | GO:0004672 | |
Trre15g03968 | 699 | Gene3D | Transferase(Phosphotransferase) domain 1 | 415 | 627 | - | - | |
Trre15g03968 | 699 | ProSiteProfiles | Protein kinase domain profile. | 339 | 613 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre15g03968 | 699 | Gene3D | Phosphorylase Kinase; domain 1 | 301 | 414 | - | - | |
Trre15g03968 | 699 | FunFam | Wall-associated receptor kinase-like 20 | 415 | 623 | - | - | |
Trre15g03968 | 699 | Pfam | Protein kinase domain | 340 | 606 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre15g03968 | 699 | SMART | serkin_6 | 339 | 619 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre15g03968 | 699 | FunFam | Wall-associated receptor kinase-like 14 | 306 | 414 | - | - | |
Trre15g03968 | 699 | MobiDBLite | consensus disorder prediction | 671 | 699 | - | - | |
Trre15g03968 | 699 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 458 | 470 | IPR008271 | GO:0004672|GO:0006468 | |
Trre15g03968 | 699 | SUPERFAMILY | Protein kinase-like (PK-like) | 321 | 608 | IPR011009 | - | |
Trre15g03968 | 699 | MobiDBLite | consensus disorder prediction | 675 | 699 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre15g03968 | Trre-Chr15 | 49824473 | 49829654 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre15g03968 | 5 | 697 | Receptor kinase-like Gene Family | AT2G23450 | 54.196 | 0.0 | 707 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK_LRK10L-1 | Trre15g03968 | Pkinase | 2.1e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre15g03968 | - | - | gmx:100810861 | 986.867 |