Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03924 ATGGAAGATGGTGAAGCTACCAGTTGGGTCGAGCGAAAACGCAAAAGGTTGAACTGGTGGCGTCAGATGGTGGCATCGCGACTCTCCCAAGTAGTCGATTGCACCACCACGTGCCCAGGCTACATCACAGCGGCTGGGAGAAATGAAGATGGGAGATACGACTGCGAAGATGGAAGAAACGACAAAAGAAGAGAGAAACAAAGGGATAAACATATCTTGTCGCACTTCCCACCATCTATCACAATGTCAGGGATTGCAAGAGAGATTACCCATCGGTGTGCAGCGTGCAAGCAACAACATCGAAGATGCGATTCATCCTGTGATTTAGCTCCATTCTTTCCACCGGACAACCAACAACGTTTCAGAGCTGTACATGAAGTATTCGGAAGGAGCAATGTGTCCAAGATGTTGCGGGAAATAGACCCAACGCTACGTGACAACACAGTTGATTCGTTAGTGTTTGAGGCCGAGACTCGTCTGAGGGACCCAATTAATGGGTATTTGACTGATGCTCACAATCTTGAGCATCGGTTGATGGAAATTCAACAAGAAATCACAAATATGAAGAGCGAACTCACAAAATACATCAGTCCCGAGGTAATTCAAACAGTGATGAATAATCCTACTTGTTTCGGCTTTGAGCCTCGCGGCAATCAAAATTCACCTGCTCAGTTGACTGCCGCTCAACATGAACAGTTAGAAGTGCTGCGACAAAGAATTAATAGGTCCGACACGGGGTTCAACTTTGTTGATGGTGATGTGTTTGGGCAACATGATATGATTAACGGTGCTAAATGA 798 0.4599 MEDGEATSWVERKRKRLNWWRQMVASRLSQVVDCTTTCPGYITAAGRNEDGRYDCEDGRNDKRREKQRDKHILSHFPPSITMSGIAREITHRCAACKQQHRRCDSSCDLAPFFPPDNQQRFRAVHEVFGRSNVSKMLREIDPTLRDNTVDSLVFEAETRLRDPINGYLTDAHNLEHRLMEIQQEITNMKSELTKYISPEVIQTVMNNPTCFGFEPRGNQNSPAQLTAAQHEQLEVLRQRINRSDTGFNFVDGDVFGQHDMINGAK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03924 265 Coils Coil 164 191 - -
Trre15g03924 265 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 91 218 - -
Trre15g03924 265 ProSiteProfiles LOB domain profile. 91 192 IPR004883 -
Trre15g03924 265 Pfam Lateral organ boundaries (LOB) domain 92 189 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03924 Trre-Chr15 49166873 49175383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03924 93 236 AS2 family AT5G66870 39.456 7.36e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Trre15g03924 LOB 2.5e-30 No_clan