Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre15g03917 | ATGGGTCTCTGCACTTCAAAACCAAATTCTGAACCTCACAATAACATAATCATTCAATTACAACAAGAAATCACTGTTGATTCTGATTCAAATCCAGTAGTTGAAATTCAAAACCCTAAAAAATCACCTTTTTTCCCTTTTTATACTCCAAGTCCTGCTAACCATTTTTTCTCCGGCAAGTTTCCTAAAACTCCGGCGACTCAAAGAACTCCGAGGAGATTTTTTAAACCGGCGTCTCCGGCGAAGCACATTAGGTCGTTGCTTGCTCGGCGTCATGGTTCCGTTAAGCCGAATGGCGGTGCTAGTATTTCGGAAGGGAGTGAAGGTGAAGGTGTTGCTCCTCTTGATAAGAATTTTGGATTTTCTAAGCATTTTGGTAGTAAATACCAGCTTGGTGAAGAAGTTGGTAGAGGACATTTTGGTTATACTTGTTCTGCTGTTGTTAAGGTTAATCATAAGGGTGAGATTAAGGGTCATAGTGTTGCTGTTAAAGTTATTCAGAAAGTTAAGATGACTACTGCTATTGCTATTGAGGATGTTAGAAGGGAAGTGAAAATTTTGAGAGCTTTGAATGGACACAAAAATTTGATTAAATTCTATGAGGCTTATGAAGACCATGATAATGTCTATATAGTCATGGAGTTGTGCGAAGGAGGCGAGCTTTTGGACAGAATTCTATCGAGAGGTGGGAAATACTCAGAGGAAGATGCAAAAGCTGTCATGACACAAATACTGAATGTTGTTGCATTTTGCCATCTACAAGGTGTTGTTCATCGTGATCTTAAACCCGAGAACTTCTTGTTTTCAACCAAAGACGAGAACTCAGAGCTGAAGGCGATAGACTTTGGTTTGTCTGATTTTGTCAAACCAGATGAACGGCTTAATGATATCGTTGGTAGTGCATACTATGTGGCTCCCGAGGTACTGCACAGAGCATACAATACAGAGGCTGACACATGGAGTATTGGCGTGATTGCATATATTTTATTATGCGGCAGTCGTCCATTTTGGGCACGGACTGAATCCGGGATCTTTCGTTCCGTATTGAAAGCTGATCCAACTTTTGATGAACCTCCTTGGCCTTCTTTGTCAGATGAGGCACAAGATTTTGTTAAGCGATTACTAAATAAAGATCCAAGGAAGAGAATGACTGCAGCACAGGCATTAGGTCATCCATGGATTAAAAGTTATAATATTGTAAAAGTACCCCTGGATATTCTAGTGTTCAAGCTCATGAAGTCATACATGCGTTCCTCCTCTCTACGAAAAGCAGCTTTAAGGGCTCTGTCTAAGACGTTAGCTACTGATGAGCTGAATTATTTGAAGGAGCAGTTTTCACTTTTAGAACCAAACAAAAATGGCACCATTAGCTTGGAAAATATCAAAGCGGCCTTGATGAAGAATGCAACAGATGCTATGAAGGAGTCTCGCATTCCTGATCTTCTGGCATCACTCAATGCCTTGCAATATAGAAGGATGGATTTTGACGAGTTCTGTGCAGCTGCACTCAGTGTTCATCAACTTGAAGCACTTGACCGGTGGGACCAACATGCACGCTGTGCCTATGAAATTTTTGAAAAGGATGGAAACAGAGCTATCATGATTGAGGAACTAGCTTCGGAGCTTGGCCTTGGTCCATCAGTACCTGTTCATGCTGTTCTTCATGACTGGATAAGGCACACCGATGGAAAGTTAAGCTTCCTAGGGTTTGTTAAGTTGCTACACGGTCCATCTCGAAGTCTTGTAAAACCTCCTCAGTAA | 1761 | 0.4128 | MGLCTSKPNSEPHNNIIIQLQQEITVDSDSNPVVEIQNPKKSPFFPFYTPSPANHFFSGKFPKTPATQRTPRRFFKPASPAKHIRSLLARRHGSVKPNGGASISEGSEGEGVAPLDKNFGFSKHFGSKYQLGEEVGRGHFGYTCSAVVKVNHKGEIKGHSVAVKVIQKVKMTTAIAIEDVRREVKILRALNGHKNLIKFYEAYEDHDNVYIVMELCEGGELLDRILSRGGKYSEEDAKAVMTQILNVVAFCHLQGVVHRDLKPENFLFSTKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYNTEADTWSIGVIAYILLCGSRPFWARTESGIFRSVLKADPTFDEPPWPSLSDEAQDFVKRLLNKDPRKRMTAAQALGHPWIKSYNIVKVPLDILVFKLMKSYMRSSSLRKAALRALSKTLATDELNYLKEQFSLLEPNKNGTISLENIKAALMKNATDAMKESRIPDLLASLNALQYRRMDFDEFCAAALSVHQLEALDRWDQHARCAYEIFEKDGNRAIMIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKPPQ | 586 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre15g03917 | 586 | Pfam | Protein kinase domain | 129 | 394 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre15g03917 | 586 | FunFam | CDPK-related kinase 3 | 121 | 296 | - | - | |
Trre15g03917 | 586 | Gene3D | Transferase(Phosphotransferase) domain 1 | 222 | 416 | - | - | |
Trre15g03917 | 586 | SUPERFAMILY | EF-hand | 422 | 576 | IPR011992 | - | |
Trre15g03917 | 586 | FunFam | Calcium-dependent protein kinase SK5 | 304 | 399 | - | - | |
Trre15g03917 | 586 | FunFam | CDPK-related kinase 1 | 431 | 503 | - | - | |
Trre15g03917 | 586 | SUPERFAMILY | Protein kinase-like (PK-like) | 126 | 424 | IPR011009 | - | |
Trre15g03917 | 586 | Gene3D | Phosphorylase Kinase; domain 1 | 122 | 221 | - | - | |
Trre15g03917 | 586 | Gene3D | - | 417 | 576 | - | - | |
Trre15g03917 | 586 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 436 | 471 | IPR002048 | GO:0005509 | |
Trre15g03917 | 586 | SMART | serkin_6 | 129 | 394 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre15g03917 | 586 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 256 | 268 | IPR008271 | GO:0004672|GO:0006468 | |
Trre15g03917 | 586 | CDD | STKc_CAMK | 128 | 393 | - | - | |
Trre15g03917 | 586 | ProSitePatterns | Protein kinases ATP-binding region signature. | 135 | 164 | IPR017441 | GO:0005524 | |
Trre15g03917 | 586 | FunFam | CDPK-related kinase 1 | 122 | 220 | - | - | |
Trre15g03917 | 586 | ProSiteProfiles | Protein kinase domain profile. | 129 | 394 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trre15g03917 | 586 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 114 | 560 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre15g03917 | Trre-Chr15 | 49107771 | 49111424 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre15g03917 | 1 | 583 | EF-hand Containing Proteins | AT3G50530 | 72.082 | 0.0 | 904 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Trre15g03917 | Pkinase | 1.1e-71 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre15g03917 | K00924 | - | gmx:100803313 | 929.472 |