Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03868 ATGACTCAGTTGGGAAAGAGAACAAGAAGATCTCAAGCACCTCAAATAATGTCCAATGAACCTCCGTCAACCAAAAAAATTAATAGTACCACCGTGAACGTATTCGCTCATCCGCCGATTGAGGAATGCTACTCTGGTATCACCGAGGAATCCTCCTCCGCATCGTATTGTTCCAGTAACAAACTATCCGATGCAGAGGTTGAGAGTGCGCAAGTTGAAACGTCAACGTGCAACGGTGATCAAATTATAAGGAGAATAGAGATGGGTTTGTTAAGCGAGGTGGTTGAAACTAATTCTACAACGCAAGAGGAAGAAGAGGTTGATTCAGCTGAGAATAAGCTGCAAAAATTGCCAACGGAATCTGAACTTGATGAATTTTTCTCTACAGCTGAAAGTCATGTTCAGAAACAGTTTCAAAACAAGTATAATTTCGACATTGCGAAGGACATGCCATTGGAAGGACGTTATGAGTGGGTTCAATTAAAGCCATAA 492 0.4146 MTQLGKRTRRSQAPQIMSNEPPSTKKINSTTVNVFAHPPIEECYSGITEESSSASYCSSNKLSDAEVESAQVETSTCNGDQIIRRIEMGLLSEVVETNSTTQEEEEVDSAENKLQKLPTESELDEFFSTAESHVQKQFQNKYNFDIAKDMPLEGRYEWVQLKP 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03868 163 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 40 162 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre15g03868 163 MobiDBLite consensus disorder prediction 1 29 - -
Trre15g03868 163 MobiDBLite consensus disorder prediction 97 118 - -
Trre15g03868 163 Pfam Cyclin-dependent kinase inhibitor 118 161 IPR003175 GO:0004861|GO:0005634|GO:0051726
Trre15g03868 163 PIRSF CKI_KRP_plant 1 163 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre15g03868 163 Gene3D p27 96 163 IPR044898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03868 Trre-Chr15 48459714 48461429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03868 91 163 Core Cell Cycle Gene Families AT1G49620 50.667 7.17e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03868 - - lja:Lj0g3v0118379.1 130.183