Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03867 ATGGAGAAGAAGATGACTCAGTTGGGAAAGAGAACAAGAAGATCTCAAGCACCTCAAATAATGTCCAATGAACCTCCGTCAACCAAAAAAATTAATAGTACCACCGTGAACGTATTCGCTCATCCGCCGATTGAGGAATGCTACTCTGGTATCACCGAGGAATCCTCCTCCGCATCGTATTGTTCCAGTAACAAACTATCCGATGCAGAGGTTGAGAGTGCGCAAGTTGAAACGTCAACGTGCAACGGTGATCAAATTATAAGGAGAATAGAGATGGGTTTGTTAAGCGAGGTGGTTGAAACTAATTCTACAACGCAAGAGGAAGAAGAGGTTGATTCAGCTGAGAATAAGCTGCAAAAATTGCCAACGGAATCTGAACTTGATGAATTTTTCTCTACAGCTGAAAGTCATGTTCAGAAACAGTTTCAAAACAAGTATAATTTCGACATTGCGAAGGACATGCCATTGGAAGGACGTTATGAGTGGGTTCAATTAAAGCCATAA 504 0.4147 MEKKMTQLGKRTRRSQAPQIMSNEPPSTKKINSTTVNVFAHPPIEECYSGITEESSSASYCSSNKLSDAEVESAQVETSTCNGDQIIRRIEMGLLSEVVETNSTTQEEEEVDSAENKLQKLPTESELDEFFSTAESHVQKQFQNKYNFDIAKDMPLEGRYEWVQLKP 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03867 167 MobiDBLite consensus disorder prediction 101 122 - -
Trre15g03867 167 Gene3D p27 100 167 IPR044898 -
Trre15g03867 167 MobiDBLite consensus disorder prediction 1 33 - -
Trre15g03867 167 Pfam Cyclin-dependent kinase inhibitor 122 165 IPR003175 GO:0004861|GO:0005634|GO:0051726
Trre15g03867 167 PIRSF CKI_KRP_plant 2 167 IPR044275 GO:0004861|GO:0045736|GO:0051726
Trre15g03867 167 MobiDBLite consensus disorder prediction 11 33 - -
Trre15g03867 167 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 42 166 IPR044275 GO:0004861|GO:0045736|GO:0051726
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03867 Trre-Chr15 48459714 48461441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03867 95 167 Core Cell Cycle Gene Families AT1G49620 50.667 6.77e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03867 - - lja:Lj0g3v0118379.1 130.183