Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03855 ATGGATGAGGCGCGTAAACTTTTTGTGCAAGTACGTCATCAACGTTTCACAATGGAGCACGCGTGGAGGTTGTTGAAGGATGAACCTAAATGGAAGGGAGAAGAATTGAACAACTCTTCAAAGAGATCGAAGACATCCTCTACCGGGACATATTCATCGATATCAAATCCAAAAAATCCCATTGATTGTTCAGAATACAACAGTGCAACTCAAACCGATCGTCCATTGGGACAAAAGGCGGCAAAAAGGAAGGTCAAGGGAAAAACATCTCTGTCTACAACACCCATAGTCGATTTGACCGGAATGGAAAATGCATCAGAAAAGAAATTAGTTGTCTACGGTAAAATAGCCGAAGCAAGGTTGGCAGAGAACATACCTGCGTTGTATGAAATTCTCATGAAGGACAAATCAACAATGAATGATGAGCAACGTCTAGAGCATGAAGAAATTTGTCAAAGTATCAAGGAGAAGTACTTCAAGACAAGTTAG 489 0.409 MDEARKLFVQVRHQRFTMEHAWRLLKDEPKWKGEELNNSSKRSKTSSTGTYSSISNPKNPIDCSEYNSATQTDRPLGQKAAKRKVKGKTSLSTTPIVDLTGMENASEKKLVVYGKIAEARLAENIPALYEILMKDKSTMNDEQRLEHEEICQSIKEKYFKTS 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03855 162 MobiDBLite consensus disorder prediction 27 88 - -
Trre15g03855 162 Pfam No apical meristem-associated C-terminal domain 15 144 IPR029466 -
Trre15g03855 162 MobiDBLite consensus disorder prediction 40 75 - -
Trre15g03855 162 PANTHER - 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03855 Trre-Chr15 48250633 48251121 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03855 4 86 Glutathione S-transferase Gene Family AT5G41240 36.667 1.25e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03855 - - tpra:123896514 231.876