Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03831 ATGGATGTGGACATAGTCAAAACTTCTAGTGATGGTAGCATGGACATGATATCAATGATGATGCAAATGGAAAAGTTTCCTGAACAATTTTCTGAACCTTTTTACAATACTCCCACTACTTACCAAGAAATCATCACCAATAATAATACTATTCCATTATTTAACCAAAATGCACTATCATCTCCACAAACTTTGAATAATATTGATCCAAATCTAAACTCCAATGTCAACTTCCAACAACAGTTGAATATCACACCATCAACTCTTCATAGTAACTCTTCATCATTTCCTTACTCGAACTCCTCGAATTCTTCTGATAAGAAGAATTCGATGGCAGCGATGAGGGAAATGATATTTAGGATAGCTGTGATGCAACCGATACATATTGATCCGGAATCGGTTAGGCCACCGAAGAGAAGGAACGTGAAGATATCAAAGGATCCGCAAAGCGTAGCGGCGCGACATAGAAGGGAAAGGATAAGTGAGAAGATAAGGATATTACAAAGATTAGTACCTGGTGGTACAAAAATGGACACTGCTTCTATGTTAGATGAAGCTATACATTATGTGAAGTTTTTGAAGAAACAAGTTCAAACATTGGAACAAGTAGGTGCTAATAATAATAGATCATCACAAATGTCACACATTGGTGGTGGTGTTATGAACAACTTTAATGTGAATTATTCTGGTTTGATGATGAAGGGTTGTCAACCTTTTCAAATGGTGGGGTCCACTTCTAAACAATTGCTTAGCTAG 756 0.3677 MDVDIVKTSSDGSMDMISMMMQMEKFPEQFSEPFYNTPTTYQEIITNNNTIPLFNQNALSSPQTLNNIDPNLNSNVNFQQQLNITPSTLHSNSSSFPYSNSSNSSDKKNSMAAMREMIFRIAVMQPIHIDPESVRPPKRRNVKISKDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQTLEQVGANNNRSSQMSHIGGGVMNNFNVNYSGLMMKGCQPFQMVGSTSKQLLS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03831 251 FunFam BHLH transcription factor 147 211 - -
Trre15g03831 251 SMART finulus 150 199 IPR011598 GO:0046983
Trre15g03831 251 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 144 193 IPR011598 GO:0046983
Trre15g03831 251 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 27 240 IPR045843 GO:0003700|GO:0006355
Trre15g03831 251 Pfam Helix-loop-helix DNA-binding domain 154 193 IPR011598 GO:0046983
Trre15g03831 251 CDD bHLH_AtIND_like 145 201 - -
Trre15g03831 251 MobiDBLite consensus disorder prediction 87 110 - -
Trre15g03831 251 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 148 205 IPR036638 GO:0046983
Trre15g03831 251 Gene3D - 143 215 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03831 Trre-Chr15 48002528 48003283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03831 10 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 57.674 5.57e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Trre15g03831 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03831 - - gmx:100800816 274.248