Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre15g03826 | ATGGATGATGGTGAATGGGATCTTATGTCCATTGTACGCAGCTGCAAAGCTACCACCTTTACTAATCCTAATAACATATTTGAAATGTCCCCTCCACCTCAAACCCCAATTACAATCACCACCACCAACAACATTATTCCCACTCAAAACACCACACCATCTTACTTTAGTGATTTAACAGTTATCCAAAATAATAACCAAGTCCCTGTTGCCCCACTCAAACCAACCGATTTCATAGATCTAGAGAAATTGAGAATTAATTTCAATAACAACAACACTCCTTTTGATTGTGAGTACAATCATCCATCAGTTTCACCACAACCTCCGAGACATCACAATCAACTATCAATTCTACTACCACCAAAAACCCCAATTACCATCACCACCAACAATAACATTATACCCCCTCATAACACCACACTATCTTGCTTGAACGATTTTATTGCTATGCAAGAAAACACTATACCTATCCCTCCGTTTGAACCAATTAACTTTATAGATCTAGACAAATTTATATTCAATTTACATCACAACAATACACTCCAAATCCCTGCAACATTTATCCCTAGCTCCACCACCATCACGACCCCCGCCATAATCACAAACCCCACCACTTCTATCCCAACCATTGTTCCCACCTACACCACAACTGCTCATTTTGATTGTACGTACAACCATCCATCAGTTCCACAACAACCTCTGAGACTGGACAATGACCTACCCCAAAACCTAATTACCATCACTACCACCAATAACATTATACCTCCTCAAAACACTACACCATTTGACTCGAACGATTTTACTGTTATCCAAAATAATAACTCGGATCATATCCCCTCGTTTAAACCAACAAATTTTATAGATCTAGAGAAGTTTAGTTTCAATTTCAATCACAACAATACTCCTCAAATCCCTACAACAATTATCCCCAACTCGATCACCATCATGACCCCCACCATAATGACAACCTCTACCACATCTATTCCAACAATTATTCCCACCACCACCTCCTTTTCCCCCATCTCCACCGCCACTATTCCCACCTCGTCGACTACCACCGCCCTCACCCAGATCCCAACTGCTCATTTTGAATGTGCATACAATCATCCATCAGTTCCACAACAACCCTCGGGAAAACATAATCAACTACCAAATCTACAACCTCGAACTAGTTCCACAACAATCATTCCTACCACCACCACCTTTTCCCCCATCTCCACCACTATTCCAACCTCGCCAACTACCACCATCCTCACCCAGATCCCGACTACTCATTTTGACCGTGCAGATCATCCACCAGTTCCACAACAACCCTCGGGACAACATAATCAACTGGCAAATCTACAACCTCGAACTAGTTCTAGGGTTTTACCAAATACATATCCACAACAACCAAAATGCAGATCAAGAAAGAGAAAGAATGATAACCAGGTGACATTGGTGTGCCAAGTGAAGAAGGAGAATCTTTCAGAAGATCATTGGGTATGGAGAAAATATGGACAAAAATCTATTAAAGGATCTCCACATCCAAGGAGCTACTACAAATGTAGCACTTCTAAAGATTGTTCGGCAAGAAAACTAGTAGAAAAAAGCAAGACTATAGAGAACACTTATGTTTTGACATATATTGGAGTACACAATCATGAAAAACCATTGGTTACTCGGAACTCTAGAAGGTGGAGCTACCTATCTTCTCAAAGCTCTCAAATGCGTGAGTGA | 1719 | 0.4078 | MDDGEWDLMSIVRSCKATTFTNPNNIFEMSPPPQTPITITTTNNIIPTQNTTPSYFSDLTVIQNNNQVPVAPLKPTDFIDLEKLRINFNNNNTPFDCEYNHPSVSPQPPRHHNQLSILLPPKTPITITTNNNIIPPHNTTLSCLNDFIAMQENTIPIPPFEPINFIDLDKFIFNLHHNNTLQIPATFIPSSTTITTPAIITNPTTSIPTIVPTYTTTAHFDCTYNHPSVPQQPLRLDNDLPQNLITITTTNNIIPPQNTTPFDSNDFTVIQNNNSDHIPSFKPTNFIDLEKFSFNFNHNNTPQIPTTIIPNSITIMTPTIMTTSTTSIPTIIPTTTSFSPISTATIPTSSTTTALTQIPTAHFECAYNHPSVPQQPSGKHNQLPNLQPRTSSTTIIPTTTTFSPISTTIPTSPTTTILTQIPTTHFDRADHPPVPQQPSGQHNQLANLQPRTSSRVLPNTYPQQPKCRSRKRKNDNQVTLVCQVKKENLSEDHWVWRKYGQKSIKGSPHPRSYYKCSTSKDCSARKLVEKSKTIENTYVLTYIGVHNHEKPLVTRNSRRWSYLSSQSSQMRE | 572 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre15g03826 | 572 | MobiDBLite | consensus disorder prediction | 436 | 465 | - | - | |
Trre15g03826 | 572 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 6 | 564 | IPR044810 | GO:0003700 | |
Trre15g03826 | 572 | ProSiteProfiles | WRKY domain profile. | 485 | 551 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g03826 | 572 | Gene3D | WRKY domain | 474 | 552 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g03826 | 572 | MobiDBLite | consensus disorder prediction | 425 | 475 | - | - | |
Trre15g03826 | 572 | MobiDBLite | consensus disorder prediction | 372 | 413 | - | - | |
Trre15g03826 | 572 | Pfam | WRKY DNA -binding domain | 491 | 549 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g03826 | 572 | SUPERFAMILY | WRKY DNA-binding domain | 485 | 551 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Trre15g03826 | 572 | SMART | WRKY_cls | 490 | 550 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre15g03826 | Trre-Chr15 | 47809573 | 47812786 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre15g03826 | 468 | 551 | WRKY Transcription Factor Family | AT5G52830 | 59.524 | 5.48e-27 | 110 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Trre15g03826 | WRKY | 2.2e-21 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre15g03826 | - | - | tpra:123886355 | 169.474 |