Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03802 ATGGCCGTGGAACTCATGACAGGTTACAACAACAACAACAACAACAGAACCGAAACTTTCACAACCAAAGCCGAAGAAAATGCTGTCCAAGAAGCAGCATCTGGTTTAGAAAGCGTTGAAAAACTCATCAAATTACTCTCACAAGCACGCCATAATCAATACCAACCTTCAAATCCCAACAACAACAACAATAACCCTTCCATGGAAATTGAAAGAGATTGCAACGCTGTTGCAGACATAGCTGTTTCCAAGTTCAAACGTGTTATCTCACTTCTTGAAAAAACCAGAACTGGTCATGCTCGTTTCAGAAAAGCACCTTTACCACAAACTCAACAGATACAAATTTCTGAAACACCAATCTTCAACGCTACACCTTTACAACAGATTCCACCATCAACAACAACAAATCTTCACCGTTCTATAATTCAGAGAAAAGATTCATCAAAAACCCTTAATTTTTCATACTCTTCTGCTGCTAATTCTTTCATTTCATCACTCACCGGCAGCGGCGGCGACACCGACAACAAACAACCTTCATCATCATCACCAGCTGGAGCTTTTCAAATAACAAATCTTTCTCATGTTTCATCTGTTGGTAAGCCACCACTTTCATCTTCTTCATTGAAAAGAAAGTGTAGCTCTGAAACTTTGGGTTCTGGAAAGTGTGGTAGTTCATCTAGCCGTTGTCATTGTTCCAAAAAGAGGAAAATGAGATTGAAAAGGGTTGTTAGGGTTCCTGCAATTAGCTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGAAAATATGGCCAAAAACCTATTAAAGGTTCACCTCATCCAAGGGGATACTACAAGTGCAGTAGTGTGAGAGGGTGTCCAGCAAGAAAACATGTAGAGAGAGCTCTTGATGATGCATCTATGTTGGTAGTTACTTATGAAGGAGAACACAATCACTCTCTTTCTGCAGCTGATGCTACTAATCTCATTTTAGAATCATCATAA 990 0.396 MAVELMTGYNNNNNNRTETFTTKAEENAVQEAASGLESVEKLIKLLSQARHNQYQPSNPNNNNNNPSMEIERDCNAVADIAVSKFKRVISLLEKTRTGHARFRKAPLPQTQQIQISETPIFNATPLQQIPPSTTTNLHRSIIQRKDSSKTLNFSYSSAANSFISSLTGSGGDTDNKQPSSSSPAGAFQITNLSHVSSVGKPPLSSSSLKRKCSSETLGSGKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDASMLVVTYEGEHNHSLSAADATNLILESS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03802 329 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 29 322 IPR044810 GO:0003700
Trre15g03802 329 ProSiteProfiles WRKY domain profile. 251 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre15g03802 329 SMART WRKY_cls 256 316 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre15g03802 329 Pfam Plant zinc cluster domain 209 254 IPR018872 -
Trre15g03802 329 Pfam WRKY DNA -binding domain 258 314 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre15g03802 329 SUPERFAMILY WRKY DNA-binding domain 253 316 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre15g03802 329 FunFam WRKY transcription factor 65 240 317 - -
Trre15g03802 329 Gene3D WRKY domain 244 317 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre15g03802 329 MobiDBLite consensus disorder prediction 197 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03802 Trre-Chr15 47436281 47437955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03802 25 314 WRKY Transcription Factor Family AT2G24570 44.410 2.44e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre15g03802 WRKY 9.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03802 - - gmx:100170685 402.519