Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g03792 ATGAACAACTTCACCACCACAACCCTTTCTCTTCTTCTCACACTCCTAACACTAACCCTTAACCAATGTTTTTCACTCTCTAACGACGGCGTTTTGTTACTTTCATTCAAATACGCTGTTCTAAACGACCCTTTATCAGTCCTTTCAAATTGGAACTATAGCGACCTTACACCATGTTCATGGAACGGTGTTTCTTGTTCCAACGTTGTTCTAACAACAAAAAACGATACACCATTTCGTGTTACTGCTTTATCATTACCAAATTCTCAGCTTACATGTTCTATTCCTTCTGATCTTGGTTCCATTGAACATCTTCAAATTCTTGATCTTTCTAACAATTCCATTAATGGGTCTCTTCCTTCATCTTTTTTTCAACCAAATTCAAACCTTCGTTTTATTAATTTTTCAAACAATTTGATAACAGGGGAAGTTCCAGAGTCTTTAACAGAGCTTAAAAATCTTCAGTTTCTTAACTTTTCCGACAATGCTCTCACCGGAAAACTACCCAATAATCTCTCAAACATGCAAAACTTAACCGTTGCTTCGTTTAAGAACAATTACCTCACTGGTTTTCTTCCGAAAGATTTAAGAACTTTGCAGATTTTGGATCTGTCTTCAAATTTGTTGAATGGAACTTTAAGTCCAGATTTTGGTGGTGACAACATTCGTTACTTAAACGTTTCTTACAACAGATTTTCCGGTGAAATTCCACCGGAGTTCGCCGAGAAAATTCCGAGTAACGCAACGATTGATCTCTCGTTTAATAACCTCACCGGAGAGATACCAGATTCCCCTGTTTTGTTGAACCAGGAAACAAAATTTTTCTCTGGTAACAGTGATCTATGTGGAGAACCAATGAAAAATCCATGTTCTATTCCTTCTTCACCATCTTCTGAACCTAAAGATTCTTCTCCACCTGCAATCGCCGCAATGCCGAAGAGTTTCGCCGATTCTCCTCTTTCGCAACCAGCAGAGTCGAAAAAACAGAGTGGTTTGAGAAAAGGAACGATAATAGGAATCGTAATTGGAGATTTCGTTGGAATTGGAATCTTAGCTATGGTTTTTGTTTACGTTTATAAGCTAAAGAGAAAAAAAGATGAAGAAAATGCAACAAAAAACGAAGCTAATACTACAAGAAGTGAAAGTTCATCTTCAACTTTAGAAACAAAAGGTTTCACGAGGTGGTCGTGTTTAAGAAAAAGAACAGAAGATGAAGAATCCTCGGAGACACCGAGTTCATCGGACAGTGACGTGGAAGCAGCACCGCGAAATGCGGAAGGTGTTGAAAATAAAAAGCAAGGAGAAAACAAAACCGGTTCTGGTTCTGGTTCCGGTTCGGGTACTCTTGTTACTGTTGATGGTGATAGAGAGCTTGAAGTTGAAACGCTTTTGAAAGCTTCTGCTTATATTTTAGGTGCTACTGGTTCAAGTATAATGTATAAAGCTGTTCTTGAAGATGGAACTTCTTTGGCTGTTCGGAGAATTGGTGAAAGTGGTGTTGAACGGTTCAAGGATTTTGAGAATCAGGTTCGGGTTATAGCGAAACTGGTTCATCCAAATTTGGTTCGGGTTCGTGGGTTTTATTGGGGTCATGATGAGAAACTCATTATCTATGACTTTGTTCCTAATGGTTGTCTTGCCAATGTTCGTTACAGGAAAGTGGGGTCTTCACCTAGCCACATACCGTGGGAAGTACGGCTCAAGATAGCAAAAGGAGTAGCACGTGGGCTAACTTATCTCCACGAGAAGAAGCACGTGCATGGAAATTTGAAGCCCACAAATATTCTATTGGGCAATGACATGGAGCCCAAAATTGGAGACTTTGGGCTTGAGAGAATAGTAACGGGTGACACAAGTTATAATAAAGCGGGTGGGTCAGCCCGTATATTTGGTAGCAAGAGATCAACAACCTCACGTGATAGTTTTCAAGATGTTTCATTTGGGCCTAGCCCAAGCCCAAGTCCAAGTTCTATTGGTGGTGTGTCTCCTTATCATGCTCCTGAATCGCTTAGGAATTTAAAGCCTCATCCAAAGTGGGATGTGTATTCTTTTGGTGTCATGTTTCTTGAGCTTTTAACGGGGAAGATTGTGGTTTTGGATGATTTGGGCCAAGGGCCCGCGGTTATGGTTGAGGATAAAAATCGCGCCTTGAGGATGGTTGACGTGGCGATCCGCGCTGATATGGAAGGTAAAGAAGAGGCTTTGTTGGCTTATTTTAAGTTAGGGTATAGTTGTGTGACTAATGTTCCTCAAAAAAGGCCACAAATGAAAGAAGTGTTACAAGTACTTGAAAAAATACCATCTACATTGTCGTATTATTATAGTCACTGA 2331 0.4007 MNNFTTTTLSLLLTLLTLTLNQCFSLSNDGVLLLSFKYAVLNDPLSVLSNWNYSDLTPCSWNGVSCSNVVLTTKNDTPFRVTALSLPNSQLTCSIPSDLGSIEHLQILDLSNNSINGSLPSSFFQPNSNLRFINFSNNLITGEVPESLTELKNLQFLNFSDNALTGKLPNNLSNMQNLTVASFKNNYLTGFLPKDLRTLQILDLSSNLLNGTLSPDFGGDNIRYLNVSYNRFSGEIPPEFAEKIPSNATIDLSFNNLTGEIPDSPVLLNQETKFFSGNSDLCGEPMKNPCSIPSSPSSEPKDSSPPAIAAMPKSFADSPLSQPAESKKQSGLRKGTIIGIVIGDFVGIGILAMVFVYVYKLKRKKDEENATKNEANTTRSESSSSTLETKGFTRWSCLRKRTEDEESSETPSSSDSDVEAAPRNAEGVENKKQGENKTGSGSGSGSGTLVTVDGDRELEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGESGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPSHIPWEVRLKIAKGVARGLTYLHEKKHVHGNLKPTNILLGNDMEPKIGDFGLERIVTGDTSYNKAGGSARIFGSKRSTTSRDSFQDVSFGPSPSPSPSSIGGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDLGQGPAVMVEDKNRALRMVDVAIRADMEGKEEALLAYFKLGYSCVTNVPQKRPQMKEVLQVLEKIPSTLSYYYSH 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g03792 776 SUPERFAMILY L domain-like 28 286 - -
Trre15g03792 776 MobiDBLite consensus disorder prediction 434 449 - -
Trre15g03792 776 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 196 768 IPR046959 -
Trre15g03792 776 SMART LRR_typ_2 151 175 IPR003591 -
Trre15g03792 776 SMART LRR_typ_2 196 219 IPR003591 -
Trre15g03792 776 SMART LRR_typ_2 102 126 IPR003591 -
Trre15g03792 776 Pfam Protein kinase domain 471 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03792 776 ProSiteProfiles Leucine-rich repeat profile. 104 126 IPR001611 GO:0005515
Trre15g03792 776 MobiDBLite consensus disorder prediction 285 329 - -
Trre15g03792 776 Gene3D Phosphorylase Kinase; domain 1 454 540 - -
Trre15g03792 776 MobiDBLite consensus disorder prediction 375 392 - -
Trre15g03792 776 MobiDBLite consensus disorder prediction 631 663 - -
Trre15g03792 776 Gene3D Transferase(Phosphotransferase) domain 1 542 772 - -
Trre15g03792 776 MobiDBLite consensus disorder prediction 367 450 - -
Trre15g03792 776 PRINTS Leucine-rich repeat signature 196 209 - -
Trre15g03792 776 PRINTS Leucine-rich repeat signature 105 118 - -
Trre15g03792 776 MobiDBLite consensus disorder prediction 631 659 - -
Trre15g03792 776 FunFam Nuclear pore complex protein NUP107 27 194 - -
Trre15g03792 776 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Trre15g03792 776 Coils Coil 361 381 - -
Trre15g03792 776 Gene3D Ribonuclease Inhibitor 27 196 IPR032675 -
Trre15g03792 776 Gene3D Ribonuclease Inhibitor 197 292 IPR032675 -
Trre15g03792 776 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
Trre15g03792 776 ProSiteProfiles Protein kinase domain profile. 465 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre15g03792 776 MobiDBLite consensus disorder prediction 394 408 - -
Trre15g03792 776 SUPERFAMILY Protein kinase-like (PK-like) 470 769 IPR011009 -
Trre15g03792 776 FunFam Leucine-rich repeat receptor-like protein kinase 198 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g03792 Trre-Chr15 47237529 47240879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g03792 25 776 Receptor kinase-like Gene Family AT4G37250 57.179 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre15g03792 Pkinase 4.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g03792 - - gmx:100784503 1112.06